RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 VEPH1Q14D04 833 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 MGAT5BQ3V5L5 792 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 SLC44A4Q53GD3 710 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 CNNM4Q6P4Q7 775 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 ITIH5Q86UX2 942 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 TTC9BQ8N6N2 239 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 LRRC52Q8N7C0 313 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 C1orf127Q8N9H9 656 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 GLIS3Q8NEA6 775 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 PJA1Q8NG27 643 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 SHKBP1Q8TBC3 707 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 FAM200AQ8TCP9 573 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 GPR88Q9GZN0 384 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZCWPW1Q9H0M4 648 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 DNAJC25Q9H1X3 360 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 PDE11AQ9HCR9 933 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 AGAP1Q9UPQ3 857 aa13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 R3HCC1Q9Y3T6 440 aaKnown RBP13.32□□□□□ -0.28
CTDNEP1-205ENST00000570828 USP34Q70CQ2 3546 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 VPS13AQ96RL7 3174 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 A0A1W2PRU2 124 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 KANSL1LA0AUZ9 987 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 GFRA3O60609 400 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 MOSPD3O75425 235 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 SOAT2O75908 522 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 FGF19O95750 216 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 KRT19P08727 400 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 NBL1P41271 181 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 TUFMP49411 452 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 TSPY1Q01534 308 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 DNM1Q05193 864 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 SMARCB1Q12824 385 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 BFSP1Q12934 665 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 UBXN2BQ14CS0 331 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 TEAD2Q15562 447 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 RESP18Q5W5W9 173 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 TPRG1Q6ZUI0 275 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 TMC8Q8IU68 726 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 DCP1BQ8IZD4 617 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 CSGALNACT2Q8N6G5 542 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZSCAN18Q8TBC5 510 aaPredicted RBP13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 C2orf15Q8WU43 125 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 DNASE1L2Q92874 299 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 PSMG2Q969U7 264 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 ANKRD36BP1Q96IX9 119 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZSWIM3Q96MP5 696 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 GCNAQ96QF7 691 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 C7orf25Q9BPX7 421 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 TRMT61BQ9BVS5 477 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 PLA2G2FQ9BZM2 168 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 BRD9Q9H8M2 597 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 ABI2Q9NYB9 513 aaPredicted RBP13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 HSPBP1Q9NZL4 362 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 PCDHA7Q9UN72 937 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 UBE4BO95155 1302 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 MYO15AQ9UKN7 3530 aa13.31□□□□□ -0.28
CTDNEP1-205ENST00000570828 ZNF233A6NK53 670 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 PROB1E7EW31 1015 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 HUS1O60921 280 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 TNNC2P02585 160 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 CDR1P51861 262 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 RBP5P82980 135 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 SURF1Q15526 300 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 TAF12Q16514 161 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 UNC13DQ70J99 1090 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 EPM2AIP1Q7L775 607 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 HS2ST1Q7LGA3 356 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 FRMD5Q7Z6J6 570 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 DNAJB7Q7Z6W7 309 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 LAPTM4BQ86VI4 370 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 CBWD2Q8IUF1 395 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 CEP57L1Q8IYX8 460 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 PDCL2Q8N4E4 241 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 SPPL2BQ8TCT7 592 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 DEPDC1BQ8WUY9 529 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 IRF7Q92985 503 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 BORCS6Q96GS4 357 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 FAM84AQ96KN4 292 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 LPIN3Q9BQK8 851 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 DDX23Q9BUQ8 820 aaKnown RBP13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 LRRC3Q9BY71 257 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 BLZF1Q9H2G9 400 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 TRPV4Q9HBA0 871 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 KIAA1586Q9HCI6 787 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 DOCK6Q96HP0 2047 aa13.3□□□□□ -0.28
CTDNEP1-205ENST00000570828 PSMC3P17980 439 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 ATF6P18850 670 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 GABRR2P28476 465 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 GDI1P31150 447 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 HOXD13P35453 343 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 VIPR2P41587 438 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 AFMP43652 599 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 MYL7Q01449 175 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 MYO1EQ12965 1108 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 NFE2Q16621 373 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 PROX2Q3B8N5 592 aa13.29□□□□□ -0.28
CTDNEP1-205ENST00000570828 ARHGAP15Q53QZ3 475 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms