RNA–Protein interactions for RNA: ENST00000570063.5

RSRP1-222, Transcript of arginine and serine rich protein 1, human

TSL 5

Gene RSRP1, Length 1,821 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSRP1-222	ENST00000570063	ZBTB6	Q15916	424 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	SLC27A1	Q6PCB7	646 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	IFNL1	Q8IU54	200 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	CCDC105	Q8IYK2	499 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	KIF12	Q96FN5	646 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	SNX27	Q96L92	541 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	ZMAT2	Q96NC0	199 aa	Known RBP	18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	OSMR	Q99650	979 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	EIF2A	Q9BY44	585 aa	Known RBP	18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	DCLK3	Q9C098	648 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	LCMT1	Q9UIC8	334 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	UST	Q9Y2C2	406 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	R3HDM2	Q9Y2K5	976 aa	Known RBP	18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	DERA	Q9Y315	318 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	LMAN1	P49257	510 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	SPDYC	Q5MJ68	293 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	LRRC38	Q5VT99	294 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	CATSPER4	Q7RTX7	472 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	FBXO25	Q8TCJ0	367 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	FAM124B	Q9H5Z6	455 aa	Predicted RBP	18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	SNTG2	Q9NY99	539 aa		18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
RSRP1-222	ENST00000570063		F8VP50	259 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	MICAL2	O94851	1124 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	P4HA1	P13674	534 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	CYP2B6	P20813	491 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	DHX9	Q08211	1270 aa	Known RBP	18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	MTMR3	Q13615	1198 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	ATP13A4	Q4VNC1	1196 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	CHADL	Q6NUI6	762 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	GOLGA6L1	Q8N7Z2	621 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	FAM76A	Q8TAV0	307 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	ATG4A	Q8WYN0	398 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	CPXM1	Q96SM3	734 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	OSBPL8	Q9BZF1	889 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	EPB41L4B	Q9H329	900 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	STRIP2	Q9ULQ0	834 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	GINS2	Q9Y248	185 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063		Q9Y3F1	56 aa		18.85	■□□□□ 0.61
RSRP1-222	ENST00000570063	ECEL1	O95672	775 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	VDR	P11473	427 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	CYP3A5	P20815	502 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	HOXC8	P31273	242 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	GBP1	P32455	592 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	RGS2	P41220	211 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	PLTP	P55058	493 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	RGMB	Q6NW40	437 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	NOTUM	Q6P988	496 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	ALKAL1	Q6UXT8	129 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	SAPCD2	Q86UD0	394 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	TMEM40	Q8WWA1	233 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	DNAJB3	Q8WWF6	145 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	APBA2	Q99767	749 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	HEMGN	Q9BXL5	484 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	PTPN22	Q9Y2R2	807 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	PASK	Q96RG2	1323 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	SIGLEC16	A6NMB1	481 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	TP73	O15350	636 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	TREH	O43280	583 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	ERBB2	P04626	1255 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	SLC10A3	P09131	477 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	GABRB2	P47870	512 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	CPT1A	P50416	773 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	ZNF200	P98182	395 aa	Predicted RBP	18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	BEX3	Q00994	111 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	PIGH	Q14442	188 aa	Predicted RBP	18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	CNGA2	Q16280	664 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	TXNRD3NB	Q6F5E7	133 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	DCUN1D2	Q6PH85	259 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	XYLT1	Q86Y38	959 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	JOSD2	Q8TAC2	188 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	ART4	Q93070	314 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	TMBIM4	Q9HC24	238 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	NEU2	Q9Y3R4	380 aa		18.84	■□□□□ 0.61
RSRP1-222	ENST00000570063	PPEF2	O14830	753 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	HMGCR	P04035	888 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	CTGF	P29279	349 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	RFC1	P35251	1148 aa	Predicted RBP	18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	GJC1	P36383	396 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	GPD2	P43304	727 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	NDST1	P52848	882 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	ZNF844	Q08AG5	666 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	NFX1	Q12986	1120 aa	Known RBP	18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	SNX1	Q13596	522 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	CCDC50	Q8IVM0	306 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	RCOR2	Q8IZ40	523 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	OR2W6P	Q8NHA6	318 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	SLITRK1	Q96PX8	696 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	TUBGCP4	Q9UGJ1	667 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	HES2	Q9Y543	173 aa		18.83	■□□□□ 0.6
RSRP1-222	ENST00000570063	SHOX2	O60902	331 aa	Predicted RBP	18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	MYL3	P08590	195 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	IVD	P26440	423 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	AXL	P30530	894 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	SSR1	P43307	286 aa	Known RBP	18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	KRT17	Q04695	432 aa		18.82	■□□□□ 0.6
RSRP1-222	ENST00000570063	PTK6	Q13882	451 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms