RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ABI2Q9NYB9 513 aaPredicted RBP24.26■■□□□ 1.47
RBFOX1-219ENST00000569895 ZMYM5Q9UJ78 669 aa24.26■■□□□ 1.47
RBFOX1-219ENST00000569895 PCDHB5Q9Y5E4 795 aa24.26■■□□□ 1.47
RBFOX1-219ENST00000569895 EIF3DO15371 548 aaKnown RBP eCLIP24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 HAPLN1P10915 354 aaPredicted RBP24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 MLLT6P55198 1093 aaPredicted RBP24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 MYL7Q01449 175 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 MYO1EQ12965 1108 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 ZNF528Q3MIS6 628 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 GPR158Q5T848 1215 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 C1orf228Q6PIY5 440 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 SHC4Q6S5L8 630 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 LRRTM3Q86VH5 581 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 SPATA18Q8TC71 538 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 C7orf25Q9BPX7 421 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 LPIN3Q9BQK8 851 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 ACBD6Q9BR61 282 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 GDAP2Q9NXN4 497 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 FAM13BQ9NYF5 915 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 CFAP45Q9UL16 551 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 R4GN57 208 aa24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 ZFHX2Q9C0A1 2572 aaPredicted RBP24.25■■□□□ 1.47
RBFOX1-219ENST00000569895 CHADO15335 359 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 TNNC2P02585 160 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 WNT7BP56706 349 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 BFSP1Q12934 665 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 PDCL2Q8N4E4 241 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 FAM3CQ92520 227 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 MSANTD3Q96H12 275 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 TASP1Q9H6P5 420 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 OBP2AQ9NY56 170 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 PIAS3Q9Y6X2 628 aa24.24■■□□□ 1.47
RBFOX1-219ENST00000569895 POLR2DO15514 142 aaKnown RBP24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 F13A1P00488 732 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 WEE1P30291 646 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 ME1P48163 572 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 LHX1P48742 406 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 DUOXA2Q1HG44 320 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 FOXD4L6Q3SYB3 417 aaPredicted RBP24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 FAM26FQ5R3K3 315 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 FOXD4L3Q6VB84 417 aaPredicted RBP24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 TOP6BLQ8N6T0 577 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 ZNF507Q8TCN5 953 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 GIPC2Q8TF65 315 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 MTMR12Q9C0I1 747 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 INTS13Q9NVM9 706 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 DDX43Q9NXZ2 648 aaKnown RBP24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 NDRG2Q9UN36 371 aaKnown RBP24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 SNX9Q9Y5X1 595 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 USP34Q70CQ2 3546 aa24.23■■□□□ 1.47
RBFOX1-219ENST00000569895 ATF6P18850 670 aa24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 SNRPFP62306 86 aaKnown RBP24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 CSTF1Q05048 431 aaKnown RBP24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 FCHO2Q0JRZ9 810 aa24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 STXBP5Q5T5C0 1151 aa24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 DPH6Q7L8W6 267 aa24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 MAML2Q8IZL2 1156 aaPredicted RBP24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 LEO1Q8WVC0 666 aaPredicted RBP24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 HPS3Q969F9 1004 aa24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 IER2Q9BTL4 223 aa24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 C8orf33Q9H7E9 229 aaPredicted RBP24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 HSPBP1Q9NZL4 362 aa24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 L1RE1Q9UN81 338 aa24.22■■□□□ 1.47
RBFOX1-219ENST00000569895 KINO60870 393 aaKnown RBP24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 PRPF40AO75400 957 aaKnown RBP24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 PCSK1P29120 753 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 CDR1P51861 262 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 KPNA1P52294 538 aaPredicted RBP24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 PPP2R5DQ14738 602 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 ARHGAP29Q52LW3 1261 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 UNC13DQ70J99 1090 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 CXorf38Q8TB03 319 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 ATRIPQ8WXE1 791 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 ABCB6Q9NP58 842 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 THG1LQ9NWX6 298 aaKnown RBP24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 PCDHA7Q9UN72 937 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 SCN1AP35498 2009 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 ANK1P16157 1881 aa24.21■■□□□ 1.47
RBFOX1-219ENST00000569895 UBE4BO95155 1302 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 CSH1P0DML2 217 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 CSH2P0DML3 217 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 DDX6P26196 483 aaKnown RBP eCLIP24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 RPL10AP62906 217 aaKnown RBP24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 PLCB2Q00722 1185 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 FZD5Q13467 585 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 INTS6LQ5JSJ4 861 aaKnown RBP24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 EPM2AIP1Q7L775 607 aaPredicted RBP24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 HS2ST1Q7LGA3 356 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 CBWD2Q8IUF1 395 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 GPIHBP1Q8IV16 184 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 ADGRF2Q8IZF7 708 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 GLIS3Q8NEA6 775 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 HPDLQ96IR7 371 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 PI4K2AQ9BTU6 479 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 MKNK1Q9BUB5 465 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 IL21Q9HBE4 155 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 SIX4Q9UIU6 781 aa24.2■■□□□ 1.46
RBFOX1-219ENST00000569895 PVALEFA0A1B0GWK0 134 aa24.19■■□□□ 1.46
RBFOX1-219ENST00000569895 SHISA7A6NL88 538 aa24.19■■□□□ 1.46
RBFOX1-219ENST00000569895 SOBPA7XYQ1 873 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms