RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 GIPC2Q8TF65 315 aa20.9■□□□□ 0.94
CDH11-218ENST00000569783 ZFYVE19Q96K21 471 aa20.9■□□□□ 0.94
CDH11-218ENST00000569783 GTSE1Q9NYZ3 720 aa20.9■□□□□ 0.94
CDH11-218ENST00000569783 CDV3Q9UKY7 258 aaKnown RBP20.9■□□□□ 0.94
CDH11-218ENST00000569783 COL4A2P08572 1712 aa20.9■□□□□ 0.94
CDH11-218ENST00000569783 WDR87Q6ZQQ6 2873 aa20.89■□□□□ 0.94
CDH11-218ENST00000569783 GAP43P17677 238 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 ATF6P18850 670 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 CDR1P51861 262 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 TSPY1Q01534 308 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 LPAL2Q16609 132 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 LAIR1Q6GTX8 287 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 ACCSQ96QU6 501 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 RBM12Q9NTZ6 932 aaKnown RBP20.89■□□□□ 0.93
CDH11-218ENST00000569783 PCDHB5Q9Y5E4 795 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 CLIC4Q9Y696 253 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 FRYLO94915 3013 aa20.89■□□□□ 0.93
CDH11-218ENST00000569783 DMXL1Q9Y485 3027 aa20.88■□□□□ 0.93
CDH11-218ENST00000569783 GCNT3O95395 438 aa20.88■□□□□ 0.93
CDH11-218ENST00000569783 LDHAP00338 332 aaKnown RBP20.88■□□□□ 0.93
CDH11-218ENST00000569783 HAPLN1P10915 354 aaPredicted RBP20.88■□□□□ 0.93
CDH11-218ENST00000569783 AVPR1AP37288 418 aa20.88■□□□□ 0.93
CDH11-218ENST00000569783 TFAMQ00059 246 aaKnown RBP20.88■□□□□ 0.93
CDH11-218ENST00000569783 GAS6Q14393 721 aa20.88■□□□□ 0.93
CDH11-218ENST00000569783 CRELD2Q6UXH1 353 aaPredicted RBP20.88■□□□□ 0.93
CDH11-218ENST00000569783 EFCAB13Q8IY85 973 aa20.88■□□□□ 0.93
CDH11-218ENST00000569783 CACTINQ8WUQ7 758 aaKnown RBP20.88■□□□□ 0.93
CDH11-218ENST00000569783 LRRC3BQ96PB8 259 aa20.88■□□□□ 0.93
CDH11-218ENST00000569783 FAM213AQ9BRX8 229 aa20.88■□□□□ 0.93
CDH11-218ENST00000569783 PCDHB13Q9Y5F0 798 aa20.88■□□□□ 0.93
CDH11-218ENST00000569783 SRPRBQ9Y5M8 271 aaKnown RBP20.88■□□□□ 0.93
CDH11-218ENST00000569783 PPP1R37O75864 691 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 PRAMEF12O95522 483 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 ADSSP30520 456 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 CNR2P34972 360 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 SIM2Q14190 667 aaPredicted RBP20.87■□□□□ 0.93
CDH11-218ENST00000569783 PON2Q15165 354 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 NFE2Q16621 373 aaPredicted RBP20.87■□□□□ 0.93
CDH11-218ENST00000569783 ITPRIPL2Q3MIP1 535 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 L1TD1Q5T7N2 865 aaKnown RBP20.87■□□□□ 0.93
CDH11-218ENST00000569783 TXNDC11Q6PKC3 985 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 USP49Q70CQ1 688 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 LRRTM3Q86VH5 581 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 SYCP3Q8IZU3 236 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 CMTM8Q8IZV2 173 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 SYNPOQ8N3V7 929 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 SLC46A2Q9BY10 475 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 IL21Q9HBE4 155 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 TBC1D7Q9P0N9 293 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 GPR179Q6PRD1 2367 aa20.87■□□□□ 0.93
CDH11-218ENST00000569783 MYMKA6NI61 221 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 CHURC1-FNTBB4DL54 471 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 PAPSS2O95340 614 aaPredicted RBP20.86■□□□□ 0.93
CDH11-218ENST00000569783 IDEP14735 1019 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 DDX6P26196 483 aaKnown RBP eCLIP20.86■□□□□ 0.93
CDH11-218ENST00000569783 FNTBP49356 437 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 SPEM2Q0P670 501 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 BFSP1Q12934 665 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 ALCAMQ13740 583 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 CCDC73Q6ZRK6 1079 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 LONP2Q86WA8 852 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 IKZF4Q9H2S9 585 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 FBXO2Q9UK22 296 aaPredicted RBP20.86■□□□□ 0.93
CDH11-218ENST00000569783 AGAP1Q9UPQ3 857 aa20.86■□□□□ 0.93
CDH11-218ENST00000569783 HUS1O60921 280 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 PRPF40AO75400 957 aaKnown RBP20.85■□□□□ 0.93
CDH11-218ENST00000569783 ITGB3P05106 788 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 RETP07949 1114 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 CSH1P0DML2 217 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 CSH2P0DML3 217 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 POLR2BP30876 1174 aaKnown RBP20.85■□□□□ 0.93
CDH11-218ENST00000569783 ATXN1P54253 815 aaKnown RBP20.85■□□□□ 0.93
CDH11-218ENST00000569783 TNK2Q07912 1038 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 KCNA1Q09470 495 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 Q6ZS52 159 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.85■□□□□ 0.93
CDH11-218ENST00000569783 BRSK2Q8IWQ3 736 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 MAB21L3Q8N8X9 362 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 MRPS31Q92665 395 aaKnown RBP20.85■□□□□ 0.93
CDH11-218ENST00000569783 SAAL1Q96ER3 474 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 PI4K2AQ9BTU6 479 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 STRA6Q9BX79 667 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 SMG9Q9H0W8 520 aaKnown RBP20.85■□□□□ 0.93
CDH11-218ENST00000569783 GKN1Q9NS71 199 aa20.85■□□□□ 0.93
CDH11-218ENST00000569783 RBAKQ9NYW8 714 aaPredicted RBP20.85■□□□□ 0.93
CDH11-218ENST00000569783 MAGED2Q9UNF1 606 aaPredicted RBP20.85■□□□□ 0.93
CDH11-218ENST00000569783 R3HCC1Q9Y3T6 440 aaKnown RBP20.85■□□□□ 0.93
CDH11-218ENST00000569783 TSC2P49815 1807 aa20.84■□□□□ 0.93
CDH11-218ENST00000569783 LRP3O75074 770 aa20.84■□□□□ 0.93
CDH11-218ENST00000569783 GARTP22102 1010 aa20.84■□□□□ 0.93
CDH11-218ENST00000569783 STAT6P42226 847 aa20.84■□□□□ 0.93
CDH11-218ENST00000569783 NLRP12P59046 1061 aa20.84■□□□□ 0.93
CDH11-218ENST00000569783 AMPD2Q01433 879 aa20.84■□□□□ 0.93
CDH11-218ENST00000569783 MYL7Q01449 175 aa20.84■□□□□ 0.93
CDH11-218ENST00000569783 CEBPZQ03701 1054 aaKnown RBP20.84■□□□□ 0.93
CDH11-218ENST00000569783 CUL4AQ13619 759 aa20.84■□□□□ 0.93
CDH11-218ENST00000569783 CCINQ13939 588 aa20.84■□□□□ 0.93
CDH11-218ENST00000569783 HEATR6Q6AI08 1181 aaKnown RBP20.84■□□□□ 0.93
CDH11-218ENST00000569783 CC2D1AQ6P1N0 951 aaPredicted RBP20.84■□□□□ 0.93
CDH11-218ENST00000569783 TMEM86AQ8N2M4 240 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms