RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ADCYAP1R1P41586 468 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ASPAP45381 313 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 MARCKSL1P49006 195 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 PSEN2P49810 448 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF157P51786 506 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 CLCN3P51790 818 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 GYS2P54840 703 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 EIF3BP55884 814 aaKnown RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 GSCP56915 257 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 COPS2P61201 443 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 RBP5P82980 135 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 TFAMQ00059 246 aaKnown RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF268Q14587 947 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ZBTB6Q15916 424 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 UAP1Q16222 522 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 CNGA2Q16280 664 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 DGKDQ16760 1214 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 PTPROQ16827 1216 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 SLC10A6Q3KNW5 377 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 PUS10Q3MIT2 529 aaKnown RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 SEZ6Q53EL9 994 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 MORN1Q5T089 497 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 MARCH8Q5T0T0 291 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 AGBL2Q5U5Z8 902 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 WDR78Q5VTH9 848 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 SCARA3Q6AZY7 606 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 RGMBQ6NW40 437 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 DRICH1Q6PGQ1 229 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 RUFY4Q6ZNE9 571 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 APBB1IPQ7Z5R6 666 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 CROCCP2Q86T23 111 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 DDX42Q86XP3 938 aaKnown RBP eCLIP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 JAMLQ86YT9 394 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 RHOT1Q8IXI2 618 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 THNSL1Q8IYQ7 743 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 NIPA2Q8N8Q9 360 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ATL2Q8NHH9 583 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 FAM76AQ8TAV0 307 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 FNIP1Q8TF40 1166 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 USP6NLQ92738 828 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ART4Q93070 314 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ELMO3Q96BJ8 720 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ARL8AQ96BM9 186 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 BTBD6Q96KE9 485 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 FAM84AQ96KN4 292 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 FDXACB1Q9BRP7 624 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 TMEM109Q9BVC6 243 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 MTMR12Q9C0I1 747 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 TSPYL1Q9H0U9 437 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ADAMTS10Q9H324 1103 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 PDZD7Q9H5P4 517 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 FAM204AQ9H8W3 233 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 TMBIM4Q9HC24 238 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ERVK-5Q9HDB9 667 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 GOLGA6AQ9NYA3 693 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 WHRNQ9P202 907 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 WDR35Q9P2L0 1181 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 CHORDC1Q9UHD1 332 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 SIX4Q9UIU6 781 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ANAPC7Q9UJX3 599 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 PRDM4Q9UKN5 801 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 DRG1Q9Y295 367 aaKnown RBP5.71□□□□□ -1.5
SF3B3-213ENST00000569687 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 Q9Y3F1 56 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 TLL2Q9Y6L7 1015 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 LRRC37A2A6NM11 1700 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 DOCK5Q9H7D0 1870 aa5.71□□□□□ -1.5
SF3B3-213ENST00000569687 ZNFX1Q9P2E3 1918 aaKnown RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 SMIM35A0A1B0GVV1 85 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 TCRBV7S2A1N4TA0A589 114 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 MBLAC1A4D2B0 266 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 MANSC4A6NHS7 340 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 TLR3O15455 904 aaKnown RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 B4GALT5O43286 388 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 TSPAN1O60635 241 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 HMGCRP04035 888 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 MMP3P08254 477 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 NUDT17P0C025 328 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 FAM163BP0C2L3 166 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 VDRP11473 427 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 HARSP12081 509 aaKnown RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 P4HA1P13674 534 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ARF4P18085 180 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 IVDP26440 423 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 AXLP30530 894 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 POLR2BP30876 1174 aaKnown RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ACTN2P35609 894 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 CETN2P41208 172 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 GRM5P41594 1212 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 GABRB2P47870 512 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 IRAK1P51617 712 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 GUCY2FP51841 1108 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 RAD23BP54727 409 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 INHBEP58166 350 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 ADAM17P78536 824 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 CAV1Q03135 178 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 DHX9Q08211 1270 aaKnown RBP5.7□□□□□ -1.5
SF3B3-213ENST00000569687 INCA1Q0VD86 236 aa5.7□□□□□ -1.5
SF3B3-213ENST00000569687 KLF1Q13351 362 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms