RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 MAN1C1Q9NR34 630 aa13.8□□□□□ -0.2
CNEP1R1-211ENST00000569647 NR2E1Q9Y466 385 aa13.8□□□□□ -0.2
CNEP1R1-211ENST00000569647 MUC6Q6W4X9 2439 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 ARHGEF37A1IGU5 675 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 GTPBP10A4D1E9 387 aaKnown RBP13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 CYB561D2O14569 222 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 GLUD1P00367 558 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 ODC1P11926 461 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 NOP14P78316 857 aaKnown RBP13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 SOWAHAQ2M3V2 549 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 WDR72Q3MJ13 1102 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 ZNF667Q5HYK9 610 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 SPOPLQ6IQ16 392 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 DPH6Q7L8W6 267 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 CEP57Q86XR8 500 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 TOP6BLQ8N6T0 577 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 RIN2Q8WYP3 895 aaPredicted RBP13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 FNIP2Q9P278 1114 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 L1RE1Q9UN81 338 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 POLIQ9UNA4 740 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 SNX9Q9Y5X1 595 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 USP34Q70CQ2 3546 aa13.79□□□□□ -0.2
CNEP1R1-211ENST00000569647 C2CD4DB7Z1M9 353 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 GOLGA6L19H0YKK7 550 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 TBC1D4O60343 1298 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 HUS1O60921 280 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 OAZ2O95190 189 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 RPL17P18621 184 aaKnown RBP13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 CDK11BP21127 795 aaKnown RBP13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 ASPAP45381 313 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 TNNC1P63316 161 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 PSMD5Q16401 504 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 ATAT1Q5SQI0 421 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 VARS2Q5ST30 1063 aaKnown RBP13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 PRSS55Q6UWB4 352 aaPredicted RBP13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 ANKS3Q6ZW76 656 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 GPR149Q86SP6 731 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 GAS2L3Q86XJ1 694 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 PDCL2Q8N4E4 241 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 APPL2Q8NEU8 664 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 ANKRD20A12PQ8NF67 263 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 LNX1Q8TBB1 728 aaPredicted RBP13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 SPATA18Q8TC71 538 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 KBTBD7Q8WVZ9 684 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 EDAQ92838 391 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 FAXDC2Q96IV6 333 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 IMPG2Q9BZV3 1241 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 NIF3L1Q9GZT8 377 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 VPS16Q9H269 839 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 MTRRQ9UBK8 725 aa13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 TIMM13Q9Y5L4 95 aaPredicted RBP13.78□□□□□ -0.2
CNEP1R1-211ENST00000569647 LGALS16A8MUM7 142 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 TGM5O43548 720 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 TACC1O75410 805 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 FAM163BP0C2L3 166 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 TPM4P67936 248 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 ZXDAP98168 799 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 CREMQ03060 361 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 YWHAHQ04917 246 aaPredicted RBP13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 CETN1Q12798 172 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 PDXDC1Q6P996 788 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 RSPO2Q6UXX9 243 aaPredicted RBP13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 GBP6Q6ZN66 633 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 OSTM1Q86WC4 334 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 PALB2Q86YC2 1186 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 GLYCTKQ8IVS8 523 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 ADGRF2Q8IZF7 708 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 TMEM86AQ8N2M4 240 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 RNF214Q8ND24 703 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 EHBP1Q8NDI1 1231 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 CMASQ8NFW8 434 aaPredicted RBP13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 RTP3Q9BQQ7 232 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 CRACR2AQ9BSW2 395 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 ANP32EQ9BTT0 268 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 INTS2Q9H0H0 1204 aaKnown RBP13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 SDCBP2Q9H190 292 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 SMYD3Q9H7B4 428 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 GCNT4Q9P109 453 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 DPP7Q9UHL4 492 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 DSEQ9UL01 958 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 HCN4Q9Y3Q4 1203 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 BACE2Q9Y5Z0 518 aa13.77□□□□□ -0.21
CNEP1R1-211ENST00000569647 PES1O00541 588 aaKnown RBP13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 GABRDO14764 452 aa13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 RFPL2O75678 378 aa13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 C1RP00736 705 aa13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 TPM2P07951 284 aa13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 SPATA31D3P0C874 917 aa13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 P4HA1P13674 534 aa13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 SLC9A1P19634 815 aa13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 WARSP23381 471 aaKnown RBP13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 PTPN21Q16825 1174 aa13.76□□□□□ -0.21
CNEP1R1-211ENST00000569647 EXOC3L4Q17RC7 722 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms