RNA–Protein interactions for RNA: ENST00000569624.5

CDH11-217, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-217ENST00000569624 CNOT6LQ96LI5 555 aaKnown RBP13.94□□□□□ -0.18
CDH11-217ENST00000569624 GJB4Q9NTQ9 266 aa13.94□□□□□ -0.18
CDH11-217ENST00000569624 TUBGCP4Q9UGJ1 667 aa13.94□□□□□ -0.18
CDH11-217ENST00000569624 CCL26Q9Y258 94 aa13.94□□□□□ -0.18
CDH11-217ENST00000569624 INVSQ9Y283 1065 aa13.94□□□□□ -0.18
CDH11-217ENST00000569624 TIMM13Q9Y5L4 95 aaPredicted RBP13.94□□□□□ -0.18
CDH11-217ENST00000569624 TSC2P49815 1807 aa13.94□□□□□ -0.18
CDH11-217ENST00000569624 CDC45O75419 566 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 SOAT2O75908 522 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 LARGE1O95461 756 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 ARSAP15289 507 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 LRPAP1P30533 357 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 AVPR1AP37288 418 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 MAPK8P45983 427 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 IRX6P78412 446 aaPredicted RBP13.93□□□□□ -0.18
CDH11-217ENST00000569624 VEPH1Q14D04 833 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 PDGFRLQ15198 375 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 ZNF423Q2M1K9 1284 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 RUFY3Q7L099 469 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 RAB44Q7Z6P3 723 aaPredicted RBP13.93□□□□□ -0.18
CDH11-217ENST00000569624 CHCHD4Q8N4Q1 142 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 USP13Q92995 863 aaPredicted RBP13.93□□□□□ -0.18
CDH11-217ENST00000569624 BBC3Q96PG8 261 aaPredicted RBP13.93□□□□□ -0.18
CDH11-217ENST00000569624 LPIN3Q9BQK8 851 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 MRPL4Q9BYD3 311 aaKnown RBP13.93□□□□□ -0.18
CDH11-217ENST00000569624 TDP1Q9NUW8 608 aa13.93□□□□□ -0.18
CDH11-217ENST00000569624 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.93□□□□□ -0.18
CDH11-217ENST00000569624 URB1O60287 2271 aaKnown RBP13.92□□□□□ -0.18
CDH11-217ENST00000569624 TNFRSF10BO14763 440 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 ZIC2O95409 532 aaPredicted RBP13.92□□□□□ -0.18
CDH11-217ENST00000569624 SEC24BO95487 1268 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 ENGP17813 658 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 ATF6P18850 670 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 TYMPP19971 482 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 DDX6P26196 483 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDH11-217ENST00000569624 RPA1P27694 616 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 KRT2P35908 639 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 DPP6P42658 865 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 TUFMP49411 452 aaKnown RBP13.92□□□□□ -0.18
CDH11-217ENST00000569624 SCAPQ12770 1279 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 BFSP1Q12934 665 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 STK3Q13188 491 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 SLC10A6Q3KNW5 377 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 OVOS1Q6IE37 1185 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 ANO7Q6IWH7 933 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 CC2D1AQ6P1N0 951 aaPredicted RBP13.92□□□□□ -0.18
CDH11-217ENST00000569624 SLC23A3Q6PIS1 610 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 MPZL3Q6UWV2 235 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 SYT12Q8IV01 421 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 CPA6Q8N4T0 437 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 OLIG1Q8TAK6 271 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 CD101Q93033 1021 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 TMEM134Q9H6X4 195 aa13.92□□□□□ -0.18
CDH11-217ENST00000569624 ZNF462Q96JM2 2506 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 WNT7AO00755 349 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDH11-217ENST00000569624 HOXD12P35452 270 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 ZNF268Q14587 947 aaPredicted RBP13.91□□□□□ -0.18
CDH11-217ENST00000569624 PEAR1Q5VY43 1037 aaPredicted RBP13.91□□□□□ -0.18
CDH11-217ENST00000569624 ARMCX5Q6P1M9 558 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 LPCAT2Q7L5N7 544 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 TAS1R3Q7RTX0 852 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 TMEM150AQ86TG1 271 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 MDGA1Q8NFP4 955 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 RIN3Q8TB24 985 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 SEPT5Q99719 369 aaPredicted RBP13.91□□□□□ -0.18
CDH11-217ENST00000569624 TCHPQ9BT92 498 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 TARS2Q9BW92 718 aaKnown RBP13.91□□□□□ -0.18
CDH11-217ENST00000569624 ECT2Q9H8V3 914 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 ZSWIM6Q9HCJ5 1215 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 POLD4Q9HCU8 107 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 BRMS1Q9HCU9 246 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 ARHGAP28Q9P2N2 729 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 ADAMTS9Q9P2N4 1935 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 ANK1P16157 1881 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
CDH11-217ENST00000569624 PLXNB3Q9ULL4 1909 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 EIF4E1BA6NMX2 242 aaKnown RBP13.9□□□□□ -0.18
CDH11-217ENST00000569624 MUTP22033 750 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 NPTX2P47972 431 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 FAM193AP78312 1265 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 PSMD2Q13200 908 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 HNRNPDQ14103 355 aaKnown RBP13.9□□□□□ -0.18
CDH11-217ENST00000569624 TAF12Q16514 161 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 SPDYCQ5MJ68 293 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 HDDC3Q8N4P3 179 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 MAB21L3Q8N8X9 362 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 ERMNQ8TAM6 284 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 ATP2A3Q93084 1043 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 CCDC86Q9H6F5 360 aaKnown RBP13.9□□□□□ -0.18
CDH11-217ENST00000569624 SCUBE2Q9NQ36 999 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 TMEM74BQ9NUR3 256 aa13.9□□□□□ -0.18
CDH11-217ENST00000569624 CCDC169A6NNP5 214 aa13.89□□□□□ -0.19
CDH11-217ENST00000569624 ODC1P11926 461 aa13.89□□□□□ -0.19
CDH11-217ENST00000569624 HARSP12081 509 aaKnown RBP13.89□□□□□ -0.19
CDH11-217ENST00000569624 CYP3A5P20815 502 aa13.89□□□□□ -0.19
CDH11-217ENST00000569624 NMT1P30419 496 aaKnown RBP13.89□□□□□ -0.19
CDH11-217ENST00000569624 P2RY2P41231 377 aa13.89□□□□□ -0.19
CDH11-217ENST00000569624 PTGER3P43115 390 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms