RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PIGUQ9H490 435 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 RSAD1Q9HA92 442 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ABCA8O94911 1581 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 KDM6AO15550 1401 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 C1orf232A0A0U1RR37 186 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 CLOCKO15516 846 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ADSSP30520 456 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 NCKAP1LP55160 1127 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ATP1A4Q13733 1029 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 FBXO11Q86XK2 927 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 RHPN2Q8IUC4 686 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 RPRD1BQ9NQG5 326 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ING3Q9NXR8 418 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ZC3H7BQ9UGR2 993 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 WEE2P0C1S8 567 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 NPR3P17342 541 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 KCNK10P57789 538 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ACTR2P61160 394 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SPIRE1Q08AE8 756 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 KYAT3Q6YP21 454 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 TTC30AQ86WT1 665 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 UNKQ9C0B0 810 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 NEUROG2Q9H2A3 272 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 GANQ9H2C0 597 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SLC52A2Q9HAB3 445 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SUGCTQ9HAC7 445 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SMYD2Q9NRG4 433 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 DNAAF2Q9NVR5 837 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 TRMT6Q9UJA5 497 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SNPHO15079 494 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 CAMTA2O94983 1202 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 FDFT1P37268 417 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 MMP13P45452 471 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 BNIP1Q12981 228 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 DMC1Q14565 340 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 KRT24Q2M2I5 525 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 MROH9Q5TGP6 573 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 HEATR6Q6AI08 1181 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ABRAXAS1Q6UWZ7 409 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ARMCX2Q7L311 632 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 CYP2U1Q7Z449 544 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 IQCKQ8N0W5 287 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 NUP93Q8N1F7 819 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 GALNT4Q8N4A0 578 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SYTL5Q8TDW5 730 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 TBCKQ8TEA7 893 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 TMEM120AQ9BXJ8 343 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 TMEM9Q9P0T7 183 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 VPS9D1Q9Y2B5 631 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 A2ML1A8K2U0 1454 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 FCHO1O14526 889 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 ZNF185O15231 689 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 SKAP2O75563 359 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 YARSP54577 528 aaKnown RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 BCAR1P56945 870 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 NCF4Q15080 339 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 RABL6Q3YEC7 729 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 HDAC7Q8WUI4 952 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 SNX2O60749 519 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 TGDSO95455 350 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 UCHL3P15374 230 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 LRPAP1P30533 357 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 ITGA8P53708 1063 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 NCALDP61601 193 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 EAPPQ56P03 285 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 TRIQKQ629K1 86 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 TMEM126BQ8IUX1 230 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 CCDC60Q8IWA6 550 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 TDRD5Q8NAT2 981 aaKnown RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 SLC35G2Q8TBE7 412 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 ASAP3Q8TDY4 903 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 EFHD2Q96C19 240 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 TRIM39Q9HCM9 518 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 GPCPD1Q9NPB8 672 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 APEX2Q9UBZ4 518 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 SLC12A6Q9UHW9 1150 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 PNPLA7Q6ZV29 1317 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 HNRNPDLO14979 420 aaKnown RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 RIPK2O43353 540 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 ZBED4O75132 1171 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 SERPINE1P05121 402 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 BTKQ06187 659 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 MTDHQ86UE4 582 aaKnown RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 TRIM51Q9BSJ1 452 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 RUBCNLQ9H714 662 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 FAM32AQ9Y421 112 aaKnown RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 USP17L12C9JPN9 530 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 USP17L21D6R901 530 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 FMR1Q06787 632 aaKnown RBP eCLIP7.4□□□□□ -1.221e-6■■□□□ 12.9
CNOT1-216ENST00000569240 TNFAIP8L3Q5GJ75 292 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 SDE2Q6IQ49 451 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 ULK2Q8IYT8 1036 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 ALLCQ8N6M5 410 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 PHF21AQ96BD5 680 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 APOL6Q9BWW8 343 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 DHX33Q9H6R0 707 aaKnown RBP7.4□□□□□ -1.22
CNOT1-216ENST00000569240 PCDHGC5Q9Y5F6 944 aa7.4□□□□□ -1.22
CNOT1-216ENST00000569240 ERVV-2B6SEH9 535 aa7.4□□□□□ -1.23
CNOT1-216ENST00000569240 TK2O00142 265 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 215 ms