RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ANKRD23Q86SG2 305 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 C11orf74Q86VG3 221 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 OSTM1Q86WC4 334 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 PIP4K2CQ8TBX8 421 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 WASF1Q92558 559 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 AHCYL2Q96HN2 611 aaKnown RBP8.95□□□□□ -0.98
CDH11-216ENST00000569128 CAPNS2Q96L46 248 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 PAGR1Q9BTK6 254 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 AMNQ9BXJ7 453 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 TXNRD2Q9NNW7 524 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 HOXC10Q9NYD6 342 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 CHMP5Q9NZZ3 219 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 RBPJLQ9UBG7 517 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 ZKSCAN5Q9Y2L8 839 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 PCDHA1Q9Y5I3 950 aa8.95□□□□□ -0.98
CDH11-216ENST00000569128 COL11A1P12107 1806 aaPredicted RBP8.94□□□□□ -0.98
CDH11-216ENST00000569128 MANSC4A6NHS7 340 aaPredicted RBP8.94□□□□□ -0.98
CDH11-216ENST00000569128 NKRFO15226 690 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDH11-216ENST00000569128 MT-CO1P00395 513 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 MMP1P03956 469 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 ICAM1P05362 532 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 ZSCAN22P10073 491 aaPredicted RBP8.94□□□□□ -0.98
CDH11-216ENST00000569128 ALAS1P13196 640 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 KRT15P19012 456 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 PDCP20941 246 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 PLS1Q14651 629 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 UBE2SQ16763 222 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 TMEM95Q3KNT9 176 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 MCTP1Q6DN14 999 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 EPM2AIP1Q7L775 607 aaPredicted RBP8.94□□□□□ -0.98
CDH11-216ENST00000569128 OTOP3Q7RTS5 596 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 CLEC4DQ8WXI8 215 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 TTC17Q96AE7 1141 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 TNFRSF12AQ9NP84 129 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 CCPG1Q9ULG6 757 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 YBX2Q9Y2T7 364 aaKnown RBP8.94□□□□□ -0.98
CDH11-216ENST00000569128 SIT1Q9Y3P8 196 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 KIF3AQ9Y496 699 aa8.94□□□□□ -0.98
CDH11-216ENST00000569128 CTDP1Q9Y5B0 961 aaPredicted RBP8.94□□□□□ -0.98
CDH11-216ENST00000569128 NFIBO00712 420 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 LPOP22079 712 aaPredicted RBP8.93□□□□□ -0.98
CDH11-216ENST00000569128 JAM2P57087 298 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 TRIM29Q14134 588 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 SAFBQ15424 915 aaKnown RBP eCLIP8.93□□□□□ -0.98
CDH11-216ENST00000569128 JAKMIP3Q5VZ66 844 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 SNRNP48Q6IEG0 339 aaKnown RBP8.93□□□□□ -0.98
CDH11-216ENST00000569128 USP17L6PQ6QN14 398 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 CBLL1Q75N03 491 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 DIS3L2Q8IYB7 885 aaKnown RBP8.93□□□□□ -0.98
CDH11-216ENST00000569128 BLIDQ8IZY5 108 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 PGBD1Q96JS3 809 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 ZMYND12Q9H0C1 365 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 PTPRHQ9HD43 1115 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 SH3GLB2Q9NR46 395 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 MYPNQ86TC9 1320 aa8.93□□□□□ -0.98
CDH11-216ENST00000569128 WDR33Q9C0J8 1336 aaKnown RBP8.93□□□□□ -0.98
CDH11-216ENST00000569128 ABCB11O95342 1321 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 KCNK3O14649 394 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 MEIS2O14770 477 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 EDIL3O43854 480 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 CFBP00751 764 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 LTFP02788 710 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 AMY2AP04746 511 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 DBHP09172 617 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 XBP1P17861 261 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 AMY2BP19961 511 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 HOXA13P31271 388 aaPredicted RBP8.92□□□□□ -0.98
CDH11-216ENST00000569128 KRT2P35908 639 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 TM4SF4P48230 202 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 MECP2P51608 486 aaKnown RBP8.92□□□□□ -0.98
CDH11-216ENST00000569128 ADCY7P51828 1080 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 SESN3P58005 492 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 NUCB2P80303 420 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 ADGRF1Q5T601 910 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 STEAP3Q658P3 488 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 ARHGAP36Q6ZRI8 547 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 ATG4DQ86TL0 474 aaPredicted RBP8.92□□□□□ -0.98
CDH11-216ENST00000569128 ANKRD13CQ8N6S4 541 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 CHST14Q8NCH0 376 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 C1orf162Q8NEQ5 155 aaPredicted RBP8.92□□□□□ -0.98
CDH11-216ENST00000569128 TNPO1Q92973 898 aaKnown RBP8.92□□□□□ -0.98
CDH11-216ENST00000569128 ELAC2Q9BQ52 826 aaKnown RBP8.92□□□□□ -0.98
CDH11-216ENST00000569128 MOV10L1Q9BXT6 1211 aaKnown RBP8.92□□□□□ -0.98
CDH11-216ENST00000569128 SPATC1LQ9H0A9 340 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 PSTPIP2Q9H939 334 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 PPCSQ9HAB8 311 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 SLC6A20Q9NP91 592 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 RIC8AQ9NPQ8 531 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 RNF146Q9NTX7 359 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 B4GALT6Q9UBX8 382 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 CPA4Q9UI42 421 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 PCDHA6Q9UN73 950 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 SLC45A1Q9Y2W3 748 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 MRPL11Q9Y3B7 192 aaKnown RBP8.92□□□□□ -0.98
CDH11-216ENST00000569128 DAAM1Q9Y4D1 1078 aa8.92□□□□□ -0.98
CDH11-216ENST00000569128 ADGRA2Q96PE1 1338 aa8.91□□□□□ -0.98
CDH11-216ENST00000569128 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.91□□□□□ -0.98
CDH11-216ENST00000569128 ESYT2A0FGR8 921 aa8.91□□□□□ -0.98
CDH11-216ENST00000569128 ZC3H12DA2A288 527 aaKnown RBP8.91□□□□□ -0.98
CDH11-216ENST00000569128 NUDT19A8MXV4 375 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms