RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CRTC3Q6UUV7 619 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 LRRC55Q6ZSA7 311 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 SPATC1Q76KD6 591 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 ZDHHC14Q8IZN3 488 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 NME8Q8N427 588 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 C12orf76Q8N812 135 aaPredicted RBP6.4□□□□□ -1.38
CDH13-211ENST00000568770 MRPL43Q8N983 215 aaKnown RBP6.4□□□□□ -1.38
CDH13-211ENST00000568770 TDRD5Q8NAT2 981 aaKnown RBP6.4□□□□□ -1.38
CDH13-211ENST00000568770 PIBF1Q8WXW3 757 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 RILPL2Q969X0 211 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 MISP3Q96FF7 219 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 PCYT2Q99447 389 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 MCMBPQ9BTE3 642 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 KRT23Q9C075 422 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 OSBPL2Q9H1P3 480 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 CARS2Q9HA77 564 aaKnown RBP6.4□□□□□ -1.38
CDH13-211ENST00000568770 ERVK-5Q9HDB9 667 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 C1orf112Q9NSG2 853 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 SNTG2Q9NY99 539 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 WHRNQ9P202 907 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 DUSP13Q9UII6 198 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 DBR1Q9UK59 544 aaKnown RBP6.4□□□□□ -1.38
CDH13-211ENST00000568770 ST3GAL5Q9UNP4 418 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 GINS2Q9Y248 185 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 NOC2LQ9Y3T9 749 aaKnown RBP6.4□□□□□ -1.38
CDH13-211ENST00000568770 FHOD1Q9Y613 1164 aa6.4□□□□□ -1.38
CDH13-211ENST00000568770 KDM3AQ9Y4C1 1321 aa6.4□□□□□ -1.39
CDH13-211ENST00000568770 USP24Q9UPU5 2620 aa6.4□□□□□ -1.39
CDH13-211ENST00000568770 DOCK6Q96HP0 2047 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 SMIM35A0A1B0GVV1 85 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 ITGA4P13612 1032 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 SDSP20132 328 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 CA8P35219 290 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 IKZF1Q13422 519 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 MTMR1Q13613 665 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 PUM1Q14671 1186 aaKnown RBP eCLIP6.39□□□□□ -1.39
CDH13-211ENST00000568770 SMC1AQ14683 1233 aaKnown RBP6.39□□□□□ -1.39
CDH13-211ENST00000568770 SLC10A6Q3KNW5 377 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 ATAT1Q5SQI0 421 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 KIAA1841Q6NSI8 718 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 MTHFD1LQ6UB35 978 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 KCNT2Q6UVM3 1135 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 CWC27Q6UX04 472 aaKnown RBP6.39□□□□□ -1.39
CDH13-211ENST00000568770 ZPBP2Q6X784 338 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 CYB5R4Q7L1T6 521 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 ARHGEF39Q8N4T4 335 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 ZNF655Q8N720 491 aaPredicted RBP6.39□□□□□ -1.39
CDH13-211ENST00000568770 CYP2W1Q8TAV3 490 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 FEZF2Q8TBJ5 459 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 CUL5Q93034 780 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 CDHR1Q96JP9 859 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 ZNF558Q96NG5 402 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 RTP3Q9BQQ7 232 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 FOXP3Q9BZS1 431 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 CCDC113Q9H0I3 377 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 SEMA4AQ9H3S1 761 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 AZI2Q9H6S1 392 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 ATP6V0A4Q9HBG4 840 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 CYP26B1Q9NR63 512 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 TMEM161AQ9NX61 479 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 PRR13Q9NZ81 148 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 R4GN57 208 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 CACNA1GO43497 2377 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 WDFY3Q8IZQ1 3526 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 BAHCC1Q9P281 2608 aa6.39□□□□□ -1.39
CDH13-211ENST00000568770 RALGAPA1Q6GYQ0 2036 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 FRYQ5TBA9 3013 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 SCO2A0A1W2PP80 73 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 PDPK1O15530 556 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 PPM1BO75688 479 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 WNT11O96014 354 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 EPCAMP16422 314 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 KLRC1P26715 233 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 PPM1AP35813 382 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 STAT5BP51692 787 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 FAM189BP81408 668 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 TROAPQ12815 778 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 TDGQ13569 410 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 BMS1Q14692 1282 aaKnown RBP6.38□□□□□ -1.39
CDH13-211ENST00000568770 KIZQ2M2Z5 673 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 SV2CQ496J9 727 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 TMC5Q6UXY8 1006 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 FAM43BQ6ZT52 329 aaPredicted RBP6.38□□□□□ -1.39
CDH13-211ENST00000568770 TMPRSS7Q7RTY8 843 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 PLPPR4Q7Z2D5 763 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 KIAA0319LQ8IZA0 1049 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 SLC39A11Q8N1S5 342 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 DCLK2Q8N568 766 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 LRRN4CLQ8ND94 238 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 RIN2Q8WYP3 895 aaPredicted RBP6.38□□□□□ -1.39
CDH13-211ENST00000568770 TNPO1Q92973 898 aaKnown RBP6.38□□□□□ -1.39
CDH13-211ENST00000568770 CASD1Q96PB1 797 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 DEPDC7Q96QD5 511 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 PPP1R16BQ96T49 567 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 DSCC1Q9BVC3 393 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 TMEM117Q9H0C3 514 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 GBP3Q9H0R5 595 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 ELAC1Q9H777 363 aaKnown RBP6.38□□□□□ -1.39
CDH13-211ENST00000568770 ZSWIM4Q9H7M6 989 aa6.38□□□□□ -1.39
CDH13-211ENST00000568770 SPG21Q9NZD8 308 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms