RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 GEMIN8Q9NWZ8 242 aaKnown RBP4.87□□□□□ -1.63
HERPUD1-212ENST00000567944 NEU2Q9Y3R4 380 aa4.87□□□□□ -1.63
HERPUD1-212ENST00000567944 PLEKHM1Q9Y4G2 1056 aa4.87□□□□□ -1.63
HERPUD1-212ENST00000567944 PCDHGB6Q9Y5F9 930 aa4.87□□□□□ -1.63
HERPUD1-212ENST00000567944 EPN1Q9Y6I3 576 aaPredicted RBP4.87□□□□□ -1.63
HERPUD1-212ENST00000567944 FSHBP01225 129 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 GRPP07492 148 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 PEX2P28328 305 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 SLC7A1P30825 629 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 KCNJ5P48544 419 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 CACNB3P54284 484 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 SUMO3P55854 103 aaPredicted RBP4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 TBX4P57082 545 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 RPS7P62081 194 aaKnown RBP4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 FPGSQ05932 587 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 FOXI1Q12951 378 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 HLXQ14774 488 aaPredicted RBP4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 POLD3Q15054 466 aaPredicted RBP4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 PTPAQ15257 358 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 ABHD17BQ5VST6 288 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 DARS2Q6PI48 645 aaKnown RBP4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 MICALCLQ6ZW33 695 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 SESTD1Q86VW0 696 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 FAM9AQ8IZU1 332 aaPredicted RBP4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 FAM109AQ8N4B1 249 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 AMER2Q8N7J2 671 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 SIK2Q9H0K1 926 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 CNNM1Q9NRU3 951 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 XPR1Q9UBH6 696 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 SRRDQ9UH36 339 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 TPCN1Q9ULQ1 816 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 SPATA31A3Q5VYP0 1347 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 SALL3Q9BXA9 1300 aa4.86□□□□□ -1.63
HERPUD1-212ENST00000567944 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 ISM1B1AKI9 464 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 TMEM233B4DJY2 109 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 TOR1BO14657 336 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 APAF1O14727 1248 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 THP07101 528 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 ADH4P08319 380 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 HMGB1P09429 215 aaKnown RBP4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 ITGAMP11215 1152 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 TRIM27P14373 513 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 TGM1P22735 817 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 GCLCP48506 637 aaPredicted RBP4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 CNGA2Q16280 664 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 HSP90AB2PQ58FF8 381 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 KRT78Q8N1N4 520 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 DNAJC5GQ8N7S2 189 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 BEND2Q8NDZ0 799 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 SLC30A5Q8TAD4 765 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 SSH3Q8TE77 659 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 LPIN2Q92539 896 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 Q96MF0 132 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 SLC46A1Q96NT5 459 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 HEPHQ9BQS7 1158 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 INTS13Q9NVM9 706 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 COL20A1Q9P218 1284 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 RAD54BQ9Y620 910 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 MAST3O60307 1309 aa4.85□□□□□ -1.63
HERPUD1-212ENST00000567944 TRGV11A0A075B6L2 103 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 TRIM43BA6NCK2 446 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 FOXN1O15353 648 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 PROM1O43490 865 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 SRGNP10124 158 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 PROZP22891 400 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 ADRA1BP35368 520 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 MPLP40238 635 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 VIPR2P41587 438 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 NPTX2P47972 431 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 MXRA7P84157 204 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 SLC13A2Q13183 592 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 SF3B3Q15393 1217 aaKnown RBP4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 LONRF3Q496Y0 759 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 VPS53Q5VIR6 699 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 VWA1Q6PCB0 445 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 ZNF783Q6ZMS7 281 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 TSHZ1Q6ZSZ6 1077 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 COLGALT2Q8IYK4 626 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 SLC15A4Q8N697 577 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 OR6B3Q8NGW1 331 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 OR56A3Q8NH54 315 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 SNX19Q92543 992 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 TTC17Q96AE7 1141 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 TRIM43Q96BQ3 446 aaPredicted RBP4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 NMD3Q96D46 503 aaKnown RBP4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 PTCD3Q96EY7 689 aaKnown RBP4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 MESP1Q9BRJ9 268 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 APOL5Q9BWW9 433 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 AMBRA1Q9C0C7 1298 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 TTYH3Q9C0H2 523 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 ARNT2Q9HBZ2 717 aa4.84□□□□□ -1.63
HERPUD1-212ENST00000567944 VWC2LB2RUY7 222 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 F8W8V4 182 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 PRC1O43663 620 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 PPP3CBP16298 524 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 NDUFV1P49821 464 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 SEC24CP53992 1094 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 COL10A1Q03692 680 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 HLTFQ14527 1009 aaKnown RBP eCLIP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms