RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 HAPLN1P10915 354 aaPredicted RBP20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 GAP43P17677 238 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 ARHGAP8P85298 464 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 CYP4F8P98187 520 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 SATB1Q01826 763 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 LMNB2Q03252 620 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 CRELD2Q6UXH1 353 aaPredicted RBP20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 LRRTM3Q86VH5 581 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 ZNF560Q96MR9 790 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 ACCSQ96QU6 501 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 FAM213AQ9BRX8 229 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 IKZF4Q9H2S9 585 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 RBM12Q9NTZ6 932 aaKnown RBP20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 ABI2Q9NYB9 513 aaPredicted RBP20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 GTSE1Q9NYZ3 720 aa20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 SRPRBQ9Y5M8 271 aaKnown RBP20.3■□□□□ 0.84
GTF3C1-207ENST00000567806 ATF6P18850 670 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 ADSSP30520 456 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 CTHP32929 405 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 PNPLA4P41247 253 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 GAS6Q14393 721 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 PTPAQ15257 358 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 LPAL2Q16609 132 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 EFCAB13Q8IY85 973 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 CACTINQ8WUQ7 758 aaKnown RBP20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 TBC1D7Q9P0N9 293 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 ZMYM5Q9UJ78 669 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 PCDHB5Q9Y5E4 795 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 PCDHB13Q9Y5F0 798 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 CACNA1AO00555 2505 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 TICRRQ7Z2Z1 1910 aa20.29■□□□□ 0.84
GTF3C1-207ENST00000567806 MYMKA6NI61 221 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 LDHAP00338 332 aaKnown RBP20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 TFAMQ00059 246 aaKnown RBP20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 TSPY1Q01534 308 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 PON2Q15165 354 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 L1TD1Q5T7N2 865 aaKnown RBP20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 LAIR1Q6GTX8 287 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 TXNDC11Q6PKC3 985 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 PRR23BQ6ZRT6 265 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 SYCP3Q8IZU3 236 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 STRA6Q9BX79 667 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 SLC46A2Q9BY10 475 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 IL21Q9HBE4 155 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 FBXO2Q9UK22 296 aaPredicted RBP20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 AGAP1Q9UPQ3 857 aa20.28■□□□□ 0.84
GTF3C1-207ENST00000567806 CHURC1-FNTBB4DL54 471 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 PPP1R37O75864 691 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 GCNT3O95395 438 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 PRAMEF12O95522 483 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 IDEP14735 1019 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 CNR2P34972 360 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 AVPR1AP37288 418 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 FNTBP49356 437 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 CEBPZQ03701 1054 aaKnown RBP20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 KCNA1Q09470 495 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 CUL4AQ13619 759 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 SIM2Q14190 667 aaPredicted RBP20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 NFE2Q16621 373 aaPredicted RBP20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 ITPRIPL2Q3MIP1 535 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 SYNPOQ8N3V7 929 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 CLIC6Q96NY7 704 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 GKN1Q9NS71 199 aa20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 CDV3Q9UKY7 258 aaKnown RBP20.27■□□□□ 0.84
GTF3C1-207ENST00000567806 HUS1O60921 280 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 PRPF40AO75400 957 aaKnown RBP20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 POLR2BP30876 1174 aaKnown RBP20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 TNK2Q07912 1038 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 CCDC73Q6ZRK6 1079 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 Q6ZS52 159 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 LONP2Q86WA8 852 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 CMTM8Q8IZV2 173 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 DNAJC19Q96DA6 116 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 SAAL1Q96ER3 474 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 PI4K2AQ9BTU6 479 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 PANK2Q9BZ23 570 aa20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 SMG9Q9H0W8 520 aaKnown RBP20.26■□□□□ 0.83
GTF3C1-207ENST00000567806 CEP250Q9BV73 2442 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 COL4A2P08572 1712 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 HRO43593 1189 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 PAPSS2O95340 614 aaPredicted RBP20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 F11P03951 625 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 ITGB3P05106 788 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 RETP07949 1114 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 CSH1P0DML2 217 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 CSH2P0DML3 217 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 GARTP22102 1010 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 TGM1P22735 817 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 DDX6P26196 483 aaKnown RBP eCLIP20.25■□□□□ 0.831e-7■■■■□ 24.5
GTF3C1-207ENST00000567806 ATXN1P54253 815 aaKnown RBP20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 NLRP12P59046 1061 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 SPEM2Q0P670 501 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 BFSP1Q12934 665 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 ALCAMQ13740 583 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 HEATR6Q6AI08 1181 aaKnown RBP20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 BRSK2Q8IWQ3 736 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 CSGALNACT2Q8N6G5 542 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 MAB21L3Q8N8X9 362 aa20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 NOC3LQ8WTT2 800 aaKnown RBP20.25■□□□□ 0.83
GTF3C1-207ENST00000567806 MRPS31Q92665 395 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms