RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 HOXD12P35452 270 aa15.04■□□□□ -0
SMG1-213ENST00000567737 AVPR1AP37288 418 aa15.04■□□□□ -0
SMG1-213ENST00000567737 GPR17Q13304 367 aa15.04■□□□□ -0
SMG1-213ENST00000567737 VEPH1Q14D04 833 aa15.04■□□□□ -0
SMG1-213ENST00000567737 PDGFRLQ15198 375 aa15.04■□□□□ -0
SMG1-213ENST00000567737 ADCK5Q3MIX3 580 aa15.04■□□□□ -0
SMG1-213ENST00000567737 XKR4Q5GH76 650 aa15.04■□□□□ -0
SMG1-213ENST00000567737 ATF7IP2Q5U623 682 aa15.04■□□□□ -0
SMG1-213ENST00000567737 LARP1BQ659C4 914 aaKnown RBP15.04■□□□□ -0
SMG1-213ENST00000567737 NAIF1Q69YI7 327 aaPredicted RBP15.04■□□□□ -0
SMG1-213ENST00000567737 GALNT17Q6IS24 598 aa15.04■□□□□ -0
SMG1-213ENST00000567737 SLFN12Q8IYM2 578 aa15.04■□□□□ -0
SMG1-213ENST00000567737 CMTM8Q8IZV2 173 aa15.04■□□□□ -0
SMG1-213ENST00000567737 CPA6Q8N4T0 437 aa15.04■□□□□ -0
SMG1-213ENST00000567737 PIGOQ8TEQ8 1089 aa15.04■□□□□ -0
SMG1-213ENST00000567737 EZH1Q92800 747 aaPredicted RBP15.04■□□□□ -0
SMG1-213ENST00000567737 BRF1Q92994 677 aa15.04■□□□□ -0
SMG1-213ENST00000567737 CRELD1Q96HD1 420 aa15.04■□□□□ -0
SMG1-213ENST00000567737 ESYT1Q9BSJ8 1104 aa15.04■□□□□ -0
SMG1-213ENST00000567737 SLC46A2Q9BY10 475 aa15.04■□□□□ -0
SMG1-213ENST00000567737 CCDC113Q9H0I3 377 aa15.04■□□□□ -0
SMG1-213ENST00000567737 DKK4Q9UBT3 224 aa15.04■□□□□ -0
SMG1-213ENST00000567737 APOBEC2Q9Y235 224 aaKnown RBP15.04■□□□□ -0
SMG1-213ENST00000567737 SLC27A5Q9Y2P5 690 aa15.04■□□□□ -0
SMG1-213ENST00000567737 EDN1P05305 212 aa15.03■□□□□ -0
SMG1-213ENST00000567737 CD59P13987 128 aa15.03■□□□□ -0
SMG1-213ENST00000567737 ATP2B1P20020 1258 aa15.03■□□□□ -0
SMG1-213ENST00000567737 P2RY2P41231 377 aa15.03■□□□□ -0
SMG1-213ENST00000567737 GRM5P41594 1212 aa15.03■□□□□ -0
SMG1-213ENST00000567737 OSTNP61366 133 aa15.03■□□□□ -0
SMG1-213ENST00000567737 KRT32Q14532 448 aa15.03■□□□□ -0
SMG1-213ENST00000567737 SPDYCQ5MJ68 293 aa15.03■□□□□ -0
SMG1-213ENST00000567737 CENPPQ6IPU0 288 aa15.03■□□□□ -0
SMG1-213ENST00000567737 ALKAL1Q6UXT8 129 aa15.03■□□□□ -0
SMG1-213ENST00000567737 Q6ZUG5 572 aa15.03■□□□□ -0
SMG1-213ENST00000567737 TRIM22Q8IYM9 498 aa15.03■□□□□ -0
SMG1-213ENST00000567737 OLIG1Q8TAK6 271 aa15.03■□□□□ -0
SMG1-213ENST00000567737 RLN3Q8WXF3 142 aa15.03■□□□□ -0
SMG1-213ENST00000567737 ZMAT2Q96NC0 199 aaKnown RBP15.03■□□□□ -0
SMG1-213ENST00000567737 CAMK1GQ96NX5 476 aa15.03■□□□□ -0
SMG1-213ENST00000567737 NAP1L4Q99733 375 aaKnown RBP15.03■□□□□ -0
SMG1-213ENST00000567737 HSD17B14Q9BPX1 270 aa15.03■□□□□ -0
SMG1-213ENST00000567737 KIF9Q9HAQ2 790 aa15.03■□□□□ -0
SMG1-213ENST00000567737 PILRBQ9UKJ0 227 aa15.03■□□□□ -0
SMG1-213ENST00000567737 A0A087WV48 116 aa15.02■□□□□ -0
SMG1-213ENST00000567737 MTMR11A4FU01 709 aa15.02■□□□□ -0
SMG1-213ENST00000567737 OR6C75A6NL08 312 aa15.02■□□□□ -0
SMG1-213ENST00000567737 ATXN7O15265 892 aaPredicted RBP15.02■□□□□ -0
SMG1-213ENST00000567737 OAZ2O95190 189 aa15.02■□□□□ -0
SMG1-213ENST00000567737 SERPINF2P08697 491 aa15.02■□□□□ -0
SMG1-213ENST00000567737 KCNE1P15382 129 aa15.02■□□□□ -0
SMG1-213ENST00000567737 ITPKAP23677 461 aa15.02■□□□□ -0
SMG1-213ENST00000567737 NAMPTP43490 491 aa15.02■□□□□ -0
SMG1-213ENST00000567737 ABCG1P45844 678 aa15.02■□□□□ -0
SMG1-213ENST00000567737 TAF12Q16514 161 aa15.02■□□□□ -0
SMG1-213ENST00000567737 PEAR1Q5VY43 1037 aaPredicted RBP15.02■□□□□ -0
SMG1-213ENST00000567737 RABEPKQ7Z6M1 372 aa15.02■□□□□ -0
SMG1-213ENST00000567737 USP37Q86T82 979 aa15.02■□□□□ -0
SMG1-213ENST00000567737 SCUBE3Q8IX30 993 aa15.02■□□□□ -0
SMG1-213ENST00000567737 CEP120Q8N960 986 aa15.02■□□□□ -0
SMG1-213ENST00000567737 ATAD1Q8NBU5 361 aa15.02■□□□□ -0
SMG1-213ENST00000567737 WHAMMQ8TF30 809 aa15.02■□□□□ -0
SMG1-213ENST00000567737 C18orf25Q96B23 403 aaPredicted RBP15.02■□□□□ -0
SMG1-213ENST00000567737 FNBP1Q96RU3 617 aa15.02■□□□□ -0
SMG1-213ENST00000567737 ECT2Q9H8V3 914 aa15.02■□□□□ -0
SMG1-213ENST00000567737 CCL26Q9Y258 94 aa15.02■□□□□ -0
SMG1-213ENST00000567737 SH3BP5O60239 455 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 SOAT2O75908 522 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 SYPP08247 313 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 XRCC6P12956 609 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMG1-213ENST00000567737 SEC13P55735 322 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 SLC14A1Q13336 389 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 BYSLQ13895 437 aaKnown RBP15.01□□□□□ -0.01
SMG1-213ENST00000567737 PPP2R5AQ15172 486 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 CRY1Q16526 586 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 TSGA10IPQ3SY00 556 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 C2orf27AQ580R0 203 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 NT5DC1Q5TFE4 455 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 TTC9BQ8N6N2 239 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 MAB21L3Q8N8X9 362 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 USP33Q8TEY7 942 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 BSNDQ8WZ55 320 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 USP13Q92995 863 aaPredicted RBP15.01□□□□□ -0.01
SMG1-213ENST00000567737 NACC1Q96RE7 527 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 LPIN3Q9BQK8 851 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 IL21Q9HBE4 155 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 ZSWIM6Q9HCJ5 1215 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 TDP1Q9NUW8 608 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 DNAAF2Q9NVR5 837 aaKnown RBP15.01□□□□□ -0.01
SMG1-213ENST00000567737 BCCIPQ9P287 314 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMG1-213ENST00000567737 MMP17Q9ULZ9 603 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 TNFSF13BQ9Y275 285 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 TIMM13Q9Y5L4 95 aaPredicted RBP15.01□□□□□ -0.01
SMG1-213ENST00000567737 ACACAQ13085 2346 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 CELSR3Q9NYQ7 3312 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 NAV2Q8IVL1 2488 aa15.01□□□□□ -0.01
SMG1-213ENST00000567737 A0A087WWV3 80 aa15□□□□□ -0.01
SMG1-213ENST00000567737 J3QKU1 62 aa15□□□□□ -0.01
SMG1-213ENST00000567737 ARHGAP33O14559 1287 aa15□□□□□ -0.01
SMG1-213ENST00000567737 DEXIO95424 95 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms