RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SCN1AP35498 2009 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 SPTBN4Q9H254 2564 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 MYO15AQ9UKN7 3530 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 VNN2O95498 520 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 TMEM191BP0C7N4 346 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 CSH1P0DML2 217 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 CSH2P0DML3 217 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 AVPR1AP37288 418 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 CXCL12P48061 93 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 RPL10AP62906 217 aaKnown RBP20.04■□□□□ 0.8
LINC01238-205ENST00000567549 CEBPZQ03701 1054 aaKnown RBP20.04■□□□□ 0.8
LINC01238-205ENST00000567549 MYO1EQ12965 1108 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 RESTQ13127 1097 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 PUM1Q14671 1186 aaKnown RBP eCLIP20.04■□□□□ 0.8
LINC01238-205ENST00000567549 STK38Q15208 465 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 SYNPOQ8N3V7 929 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 CELF5Q8N6W0 485 aaKnown RBP20.04■□□□□ 0.8
LINC01238-205ENST00000567549 OR10T2Q8NGX3 314 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 BPIFB1Q8TDL5 484 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 NELL1Q92832 810 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 ZNF396Q96N95 335 aaPredicted RBP20.04■□□□□ 0.8
LINC01238-205ENST00000567549 STRA6Q9BX79 667 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 KIF9Q9HAQ2 790 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 KIAA1586Q9HCI6 787 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 ABCB6Q9NP58 842 aa20.04■□□□□ 0.8
LINC01238-205ENST00000567549 ABI2Q9NYB9 513 aaPredicted RBP20.04■□□□□ 0.8
LINC01238-205ENST00000567549 MYMKA6NI61 221 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 EXTL3O43909 919 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 LILRB5O75023 590 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 HAPLN1P10915 354 aaPredicted RBP20.03■□□□□ 0.8
LINC01238-205ENST00000567549 CCNE1P24864 410 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 PCSK1P29120 753 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 CNR2P34972 360 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 WSCD1Q658N2 575 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 GAREM2Q75VX8 874 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 SPEM1Q8N4L4 309 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 LEO1Q8WVC0 666 aaPredicted RBP20.03■□□□□ 0.8
LINC01238-205ENST00000567549 MRPS31Q92665 395 aaKnown RBP20.03■□□□□ 0.8
LINC01238-205ENST00000567549 DNAJC19Q96DA6 116 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 ANKRD36BP1Q96IX9 119 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 ACBD6Q9BR61 282 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 CRISPLD1Q9H336 500 aa20.03■□□□□ 0.8
LINC01238-205ENST00000567549 SMG5Q9UPR3 1016 aaKnown RBP20.03■□□□□ 0.8
LINC01238-205ENST00000567549 STX6O43752 255 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 ADSSP30520 456 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 LHX1P48742 406 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 RBP5P82980 135 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 BFSP1Q12934 665 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 POTEHQ6S545 545 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 CRELD2Q6UXH1 353 aaPredicted RBP20.02■□□□□ 0.8
LINC01238-205ENST00000567549 USP49Q70CQ1 688 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 EFCAB13Q8IY85 973 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 GPD1LQ8N335 351 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 CLIC6Q96NY7 704 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 TMEM209Q96SK2 561 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 TNMDQ9H2S6 317 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 TBC1D7Q9P0N9 293 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 AGAP1Q9UPQ3 857 aa20.02■□□□□ 0.8
LINC01238-205ENST00000567549 COL4A2P08572 1712 aa20.02■□□□□ 0.79
LINC01238-205ENST00000567549 FRMD3A2A2Y4 597 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 MYBPHLA2RUH7 354 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 PRR5-ARHGAP8B1AHC4 643 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 TISP43B9A030 160 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 K7ELQ4 463 aaPredicted RBP20.01■□□□□ 0.79
LINC01238-205ENST00000567549 ARNTLO00327 626 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 TNNC2P02585 160 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 ITGB3P05106 788 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 POLR2BP30876 1174 aaKnown RBP20.01■□□□□ 0.79
LINC01238-205ENST00000567549 ARHGAP8P85298 464 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 FZD5Q13467 585 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 MAPRE1Q15691 268 aaKnown RBP20.01■□□□□ 0.79
LINC01238-205ENST00000567549 ITPRIPL2Q3MIP1 535 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 CC2D1AQ6P1N0 951 aaPredicted RBP20.01■□□□□ 0.79
LINC01238-205ENST00000567549 DPH6Q7L8W6 267 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 DGLUCYQ7Z3D6 616 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 CSGALNACT2Q8N6G5 542 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 TOP6BLQ8N6T0 577 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 FSIP1Q8NA03 581 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 NOC3LQ8WTT2 800 aaKnown RBP20.01■□□□□ 0.79
LINC01238-205ENST00000567549 LPIN3Q9BQK8 851 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 OTOGLQ3ZCN5 2332 aa20.01■□□□□ 0.79
LINC01238-205ENST00000567549 SLC38A8A6NNN8 435 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 SPECC1L-ADORA2AF8WAN1 911 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 FOXD2O60548 495 aaPredicted RBP20■□□□□ 0.79
LINC01238-205ENST00000567549 PRPF40AO75400 957 aaKnown RBP20■□□□□ 0.79
LINC01238-205ENST00000567549 SOAT2O75908 522 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 KRT19P08727 400 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 CHRNB1P11230 501 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 ATF6P18850 670 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 CTHP32929 405 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 NASPP49321 788 aaPredicted RBP20■□□□□ 0.79
LINC01238-205ENST00000567549 PDE6CP51160 858 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 LMNB2Q03252 620 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 CMTM8Q8IZV2 173 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 ZNF687Q8N1G0 1237 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 TTC9BQ8N6N2 239 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 SAAL1Q96ER3 474 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 FUBP3Q96I24 572 aaKnown RBP eCLIP20■□□□□ 0.79
LINC01238-205ENST00000567549 MAGEF1Q9HAY2 307 aa20■□□□□ 0.79
LINC01238-205ENST00000567549 GDAP2Q9NXN4 497 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms