RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 ALDH1A3P47895 512 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 AARSP49588 968 aaKnown RBP eCLIP10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 NHLH1Q02575 133 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 PLD1Q13393 1074 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 TEAD2Q15562 447 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 TAF12Q16514 161 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 CWF19L1Q69YN2 538 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 HS2ST1Q7LGA3 356 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 C1orf127Q8N9H9 656 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 FSIP1Q8NA03 581 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 STKLD1Q8NE28 680 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 LPIN3Q9BQK8 851 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 CRISPLD1Q9H336 500 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 TBC1D17Q9HA65 648 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 ARHGEF3Q9NR81 526 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 AGPAT3Q9NRZ7 376 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 RCOR1Q9UKL0 485 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 DSEQ9UL01 958 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 ZDHHC9Q9Y397 364 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 ATP6V1DQ9Y5K8 247 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 SNX9Q9Y5X1 595 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 PATJQ8NI35 1801 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 UBE4BO95155 1302 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 HELZP42694 1942 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 GREB1Q4ZG55 1949 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 A0A1W2PRU2 124 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ANO9A1A5B4 782 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ANHXE9PGG2 379 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 H0Y858 1186 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 NRG2O14511 850 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ZNF197O14709 1029 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 HCRTO43612 131 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ACTN4O43707 911 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 HUS1O60921 280 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 VNN2O95498 520 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ADRB2P07550 413 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 TNNI1P19237 187 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 HOXD13P35453 343 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 PNPLA4P41247 253 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 CCR2P41597 374 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 SYKP43405 635 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 PTPN5P54829 565 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 GPC5P78333 572 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 RBP5P82980 135 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 TSPY1Q01534 308 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 GPR17Q13304 367 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 VEPH1Q14D04 833 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 SNRNP35Q16560 246 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 SCARA3Q6AZY7 606 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ALYREFQ86V81 257 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 TTC16Q8NEE8 873 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 OR5B17Q8NGF7 314 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 GIPC2Q8TF65 315 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 SCFD1Q8WVM8 642 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ATOH1Q92858 354 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 PAGE5Q96GU1 130 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 FNBP1Q96RU3 617 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 FOXQ1Q9C009 403 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ITGA11Q9UKX5 1188 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ZFP37Q9Y6Q3 630 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 ANAPC1Q9H1A4 1944 aa10.88□□□□□ -0.67
GTF3C1-206ENST00000566779 KRBA1A5PL33 1030 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 PI15O43692 258 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 EXOC3O60645 756 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 PHACTR2O75167 634 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 POU2F2P09086 479 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 SLFN14P0C7P3 912 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 GCGRP47871 477 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 MYL7Q01449 175 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 TCF15Q12870 199 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 SNW1Q13573 536 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 MYBPC2Q14324 1141 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 UBXN2BQ14CS0 331 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 CCDC142Q17RM4 750 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 KMT5BQ4FZB7 885 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 FAM78AQ5JUQ0 283 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 STXBP5Q5T5C0 1151 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 SDHAF4Q5VUM1 108 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 CENPPQ6IPU0 288 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 EPM2AIP1Q7L775 607 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 NT5DC4Q86YG4 428 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 DCP1BQ8IZD4 617 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 ADGRF2Q8IZF7 708 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 PDCL2Q8N4E4 241 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 XXYLT1Q8NBI6 393 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 SHKBP1Q8TBC3 707 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 ZSCAN18Q8TBC5 510 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 NXPE3Q969Y0 559 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 HPDLQ96IR7 371 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 GCNAQ96QF7 691 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 MMS19Q96T76 1030 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 RTP3Q9BQQ7 232 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 PI4K2AQ9BTU6 479 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 OXCT2Q9BYC2 517 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 ZCWPW1Q9H0M4 648 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 INTS13Q9NVM9 706 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 DDX43Q9NXZ2 648 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 L1RE1Q9UN81 338 aa10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 MAGED2Q9UNF1 606 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-206ENST00000566779 ATG2BQ96BY7 2078 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms