RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 KIAA0391O15091 583 aaKnown RBP16.16■□□□□ 0.18
RNF40-209ENST00000566703 SOAT2O75908 522 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 PAPSS2O95340 614 aaPredicted RBP16.16■□□□□ 0.18
RNF40-209ENST00000566703 GCNT3O95395 438 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 ATF6P18850 670 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 SLC39A14Q15043 492 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 SYNPOQ8N3V7 929 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 LRRC52Q8N7C0 313 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 CLIC6Q96NY7 704 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 LPIN3Q9BQK8 851 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 FAM213AQ9BRX8 229 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 ZSCAN16Q9H4T2 348 aaPredicted RBP16.16■□□□□ 0.18
RNF40-209ENST00000566703 TMEM206Q9H813 350 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 PCDHB5Q9Y5E4 795 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 PATJQ8NI35 1801 aa16.16■□□□□ 0.18
RNF40-209ENST00000566703 SPECC1L-ADORA2AF8WAN1 911 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 EXTL3O43909 919 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 DDX6P26196 483 aaKnown RBP eCLIP16.15■□□□□ 0.18
RNF40-209ENST00000566703 CTHP32929 405 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 CNR2P34972 360 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 TFAMQ00059 246 aaKnown RBP16.15■□□□□ 0.18
RNF40-209ENST00000566703 TSPY1Q01534 308 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 KCNA1Q09470 495 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 DGLUCYQ7Z3D6 616 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 SYCP3Q8IZU3 236 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 TMEM86AQ8N2M4 240 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 LEO1Q8WVC0 666 aaPredicted RBP16.15■□□□□ 0.18
RNF40-209ENST00000566703 ACBD6Q9BR61 282 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 SLC46A2Q9BY10 475 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 IKZF4Q9H2S9 585 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 ABCB6Q9NP58 842 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 GDAP2Q9NXN4 497 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 RAB23Q9ULC3 237 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 AGAP1Q9UPQ3 857 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 F5P12259 2224 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 GVINP1Q7Z2Y8 2422 aa16.15■□□□□ 0.18
RNF40-209ENST00000566703 SLC38A8A6NNN8 435 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 PRR5-ARHGAP8B1AHC4 643 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 HUS1O60921 280 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 F11P03951 625 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 CSH1P0DML2 217 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 CSH2P0DML3 217 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 IDEP14735 1019 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 HMGA1P17096 107 aaKnown RBP16.14■□□□□ 0.17
RNF40-209ENST00000566703 HOXA6P31267 233 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 STAT6P42226 847 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 RPL10AP62906 217 aaKnown RBP16.14■□□□□ 0.17
RNF40-209ENST00000566703 RBP5P82980 135 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 ARHGAP8P85298 464 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 GAS6Q14393 721 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 GPIHBP1Q8IV16 184 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 CMTM8Q8IZV2 173 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 PDCL2Q8N4E4 241 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 C1orf127Q8N9H9 656 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 GIPC2Q8TF65 315 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 LRRC27Q9C0I9 530 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 PANK4Q9NVE7 773 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 ABI2Q9NYB9 513 aaPredicted RBP16.14■□□□□ 0.17
RNF40-209ENST00000566703 RBAKQ9NYW8 714 aaPredicted RBP16.14■□□□□ 0.17
RNF40-209ENST00000566703 TBC1D7Q9P0N9 293 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 GMEB2Q9UKD1 530 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 ITGA11Q9UKX5 1188 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 EP300Q09472 2414 aaPredicted RBP16.14■□□□□ 0.17
RNF40-209ENST00000566703 COL4A2P08572 1712 aa16.14■□□□□ 0.17
RNF40-209ENST00000566703 PRAMEF12O95522 483 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 POLR2BP30876 1174 aaKnown RBP16.13■□□□□ 0.17
RNF40-209ENST00000566703 SOX9P48436 509 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 NLRP12P59046 1061 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 CYP4F8P98187 520 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 MYL7Q01449 175 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 SATB1Q01826 763 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 LMNB2Q03252 620 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 CEBPZQ03701 1054 aaKnown RBP16.13■□□□□ 0.17
RNF40-209ENST00000566703 ITPRIPL2Q3MIP1 535 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 FAM173BQ6P4H8 233 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 STXBP4Q6ZWJ1 553 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 DPH6Q7L8W6 267 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 CCDC65Q8IXS2 484 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 CSGALNACT2Q8N6G5 542 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 CXorf38Q8TB03 319 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 KIF9Q9HAQ2 790 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 GKN1Q9NS71 199 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 GTSE1Q9NYZ3 720 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 UXTQ9UBK9 157 aaPredicted RBP16.13■□□□□ 0.17
RNF40-209ENST00000566703 L1RE1Q9UN81 338 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 MTMR6Q9Y217 621 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 CFAP54Q96N23 3096 aa16.13■□□□□ 0.17
RNF40-209ENST00000566703 OTOGLQ3ZCN5 2332 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 PRPF40AO75400 957 aaKnown RBP16.12■□□□□ 0.17
RNF40-209ENST00000566703 ITGB3P05106 788 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 TGM1P22735 817 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 LHX1P48742 406 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 NASPP49321 788 aaPredicted RBP16.12■□□□□ 0.17
RNF40-209ENST00000566703 CASP5P51878 434 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 WNT7BP56706 349 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 AMPD2Q01433 879 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 SURF1Q15526 300 aa16.12■□□□□ 0.17
RNF40-209ENST00000566703 RSPO4Q2I0M5 234 aaPredicted RBP16.12■□□□□ 0.17
RNF40-209ENST00000566703 LAIR1Q6GTX8 287 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms