RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 CNR2P34972 360 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 FNTBP49356 437 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 ATXN1P54253 815 aaKnown RBP17.84■□□□□ 0.45
TSR3-202ENST00000566296 POU5F1Q01860 360 aaKnown RBP17.84■□□□□ 0.45
TSR3-202ENST00000566296 SPEM2Q0P670 501 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 SV2CQ496J9 727 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 Q6ZS52 159 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.84■□□□□ 0.45
TSR3-202ENST00000566296 LONP2Q86WA8 852 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 TTC8Q8TAM2 541 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 POMGNT1Q8WZA1 660 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 HVCN1Q96D96 273 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 ST6GALNAC4Q9H4F1 302 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 PARD6AQ9NPB6 346 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 THG1LQ9NWX6 298 aaKnown RBP17.84■□□□□ 0.45
TSR3-202ENST00000566296 DPP3Q9NY33 737 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 ABI2Q9NYB9 513 aaPredicted RBP17.84■□□□□ 0.45
TSR3-202ENST00000566296 GTSE1Q9NYZ3 720 aa17.84■□□□□ 0.45
TSR3-202ENST00000566296 KIF26AQ9ULI4 1882 aaPredicted RBP17.84■□□□□ 0.45
TSR3-202ENST00000566296 TISP43B9A030 160 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 LRP3O75074 770 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 IL18RAPO95256 599 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 TSPY1Q01534 308 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 GRIN1Q05586 938 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 POSTNQ15063 836 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 PON2Q15165 354 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 PTPAQ15257 358 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 SF3A1Q15459 793 aaKnown RBP17.83■□□□□ 0.44
TSR3-202ENST00000566296 ZC2HC1CQ53FD0 456 aaPredicted RBP17.83■□□□□ 0.44
TSR3-202ENST00000566296 WSCD1Q658N2 575 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 TXNDC11Q6PKC3 985 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 SFR1Q86XK3 245 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 NT5DC4Q86YG4 428 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 DCP1BQ8IZD4 617 aaKnown RBP17.83■□□□□ 0.44
TSR3-202ENST00000566296 CCSER1Q9C0I3 900 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 STYXL1Q9Y6J8 313 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 CACNA1BQ00975 2339 aa17.83■□□□□ 0.44
TSR3-202ENST00000566296 FRYLO94915 3013 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 DENND4CQ5VZ89 1909 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
TSR3-202ENST00000566296 HAPLN1P10915 354 aaPredicted RBP17.82■□□□□ 0.44
TSR3-202ENST00000566296 TGM1P22735 817 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 PNPLA4P41247 253 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 ITPRIPL2Q3MIP1 535 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 HEATR6Q6AI08 1181 aaKnown RBP17.82■□□□□ 0.44
TSR3-202ENST00000566296 EFCAB13Q8IY85 973 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 SYNPOQ8N3V7 929 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 NETO1Q8TDF5 533 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 GIPC2Q8TF65 315 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 LRRC3BQ96PB8 259 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 IL21Q9HBE4 155 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 STK17AQ9UEE5 414 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 CCDC39Q9UFE4 941 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 EXOC7Q9UPT5 735 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 SPAG17Q6Q759 2223 aa17.82■□□□□ 0.44
TSR3-202ENST00000566296 K7ESF4 209 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 TULP1O00294 542 aaPredicted RBP17.81■□□□□ 0.44
TSR3-202ENST00000566296 DDX6P26196 483 aaKnown RBP eCLIP17.81■□□□□ 0.442e-14■■□□□ 13.2
TSR3-202ENST00000566296 DDIT3P35638 169 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 AVPR1AP37288 418 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 TXLNAP40222 546 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 CDR1P51861 262 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 TNK2Q07912 1038 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 DMWDQ09019 674 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 BFSP1Q12934 665 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 CEP68Q76N32 757 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 DYMQ7RTS9 669 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 MRPL44Q9H9J2 332 aaKnown RBP17.81■□□□□ 0.44
TSR3-202ENST00000566296 KIF9Q9HAQ2 790 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 SEL1LQ9UBV2 794 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 PCDHB5Q9Y5E4 795 aa17.81■□□□□ 0.44
TSR3-202ENST00000566296 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
TSR3-202ENST00000566296 KPNA7A9QM74 516 aa17.8■□□□□ 0.44
TSR3-202ENST00000566296 GAP43P17677 238 aa17.8■□□□□ 0.44
TSR3-202ENST00000566296 CCINQ13939 588 aa17.8■□□□□ 0.44
TSR3-202ENST00000566296 NFE2Q16621 373 aaPredicted RBP17.8■□□□□ 0.44
TSR3-202ENST00000566296 ZNF720Q7Z2F6 126 aa17.8■□□□□ 0.44
TSR3-202ENST00000566296 CMTM8Q8IZV2 173 aa17.8■□□□□ 0.44
TSR3-202ENST00000566296 SMG9Q9H0W8 520 aaKnown RBP17.8■□□□□ 0.44
TSR3-202ENST00000566296 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.8■□□□□ 0.44
TSR3-202ENST00000566296 SDK1Q7Z5N4 2213 aa17.8■□□□□ 0.44
TSR3-202ENST00000566296 OBSL1O75147 1896 aa17.8■□□□□ 0.44
TSR3-202ENST00000566296 DCDC2BA2VCK2 349 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 HRO43593 1189 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 FOXD2O60548 495 aaPredicted RBP17.79■□□□□ 0.44
TSR3-202ENST00000566296 PRPF40AO75400 957 aaKnown RBP17.79■□□□□ 0.44
TSR3-202ENST00000566296 PPP1R37O75864 691 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 POLR2BP30876 1174 aaKnown RBP17.79■□□□□ 0.44
TSR3-202ENST00000566296 NLRP12P59046 1061 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 TFAMQ00059 246 aaKnown RBP17.79■□□□□ 0.44
TSR3-202ENST00000566296 SRSF5Q13243 272 aaKnown RBP17.79■□□□□ 0.44
TSR3-202ENST00000566296 WDR44Q5JSH3 913 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 PRR23CQ6ZRP0 262 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 LRRTM3Q86VH5 581 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 BRSK2Q8IWQ3 736 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 MRPS31Q92665 395 aaKnown RBP17.79■□□□□ 0.44
TSR3-202ENST00000566296 ACCSQ96QU6 501 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 SLC46A2Q9BY10 475 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 SEMA4GQ9NTN9 838 aa17.79■□□□□ 0.44
TSR3-202ENST00000566296 UXTQ9UBK9 157 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms