RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ZNF263O14978 683 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 LAMTOR5O43504 91 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 CUTAO60888 179 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 HAPLN1P10915 354 aaPredicted RBP19.73■□□□□ 0.75
USB1-213ENST00000566292 RPS9P46781 194 aaKnown RBP19.73■□□□□ 0.75
USB1-213ENST00000566292 SMARCB1Q12824 385 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 GPD1LQ8N335 351 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 PDCL2Q8N4E4 241 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 FAM200AQ8TCP9 573 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 SPPL2BQ8TCT7 592 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 GIPC2Q8TF65 315 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 C2orf15Q8WU43 125 aaKnown RBP19.73■□□□□ 0.75
USB1-213ENST00000566292 CACTINQ8WUQ7 758 aaKnown RBP19.73■□□□□ 0.75
USB1-213ENST00000566292 E2F7Q96AV8 911 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 LRRC3BQ96PB8 259 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 CUEDC2Q9H467 287 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 ABI2Q9NYB9 513 aaPredicted RBP19.73■□□□□ 0.75
USB1-213ENST00000566292 SIX4Q9UIU6 781 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 NDRG2Q9UN36 371 aaKnown RBP19.73■□□□□ 0.75
USB1-213ENST00000566292 MRPS17Q9Y2R5 130 aaKnown RBP19.73■□□□□ 0.75
USB1-213ENST00000566292 OTOGLQ3ZCN5 2332 aa19.73■□□□□ 0.75
USB1-213ENST00000566292 MAN2B1O00754 1011 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 NCAM2O15394 837 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 FGF19O95750 216 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 LMNAP02545 664 aaKnown RBP19.72■□□□□ 0.75
USB1-213ENST00000566292 CYP4F8P98187 520 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 FCHO2Q0JRZ9 810 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 BFSP1Q12934 665 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 FOXD4L6Q3SYB3 417 aaPredicted RBP19.72■□□□□ 0.75
USB1-213ENST00000566292 GPR158Q5T848 1215 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 LMBRD2Q68DH5 695 aaPredicted RBP19.72■□□□□ 0.75
USB1-213ENST00000566292 ZC3H14Q6PJT7 736 aaKnown RBP19.72■□□□□ 0.75
USB1-213ENST00000566292 FOXD4L3Q6VB84 417 aaPredicted RBP19.72■□□□□ 0.75
USB1-213ENST00000566292 DCP1BQ8IZD4 617 aaKnown RBP19.72■□□□□ 0.75
USB1-213ENST00000566292 CSGALNACT2Q8N6G5 542 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 LRRC52Q8N7C0 313 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 MTMR12Q9C0I1 747 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 LRRC27Q9C0I9 530 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 FBXO4Q9UKT5 387 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 ITGA11Q9UKX5 1188 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 PIAS3Q9Y6X2 628 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 PTPRJQ12913 1337 aa19.72■□□□□ 0.75
USB1-213ENST00000566292 KIAA0391O15091 583 aaKnown RBP19.71■□□□□ 0.75
USB1-213ENST00000566292 ZSCAN22P10073 491 aaPredicted RBP19.71■□□□□ 0.75
USB1-213ENST00000566292 ASIC1P78348 528 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 VEPH1Q14D04 833 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 ZNF528Q3MIS6 628 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 CNNM4Q6P4Q7 775 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 EPM2AIP1Q7L775 607 aaPredicted RBP19.71■□□□□ 0.75
USB1-213ENST00000566292 OSTM1Q86WC4 334 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 HSCBQ8IWL3 235 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 IQUBQ8NA54 791 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 KCNG4Q8TDN1 519 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 INTS13Q9NVM9 706 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 GDAP2Q9NXN4 497 aa19.71■□□□□ 0.75
USB1-213ENST00000566292 GREB1Q4ZG55 1949 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 FRYLO94915 3013 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 CHADO15335 359 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 EIF3DO15371 548 aaKnown RBP eCLIP19.7■□□□□ 0.74
USB1-213ENST00000566292 HUS1O60921 280 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 PRAMEF12O95522 483 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 F13A1P00488 732 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 KRT19P08727 400 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 TMEM191BP0C7N4 346 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 GPR15P49685 360 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 RBP5P82980 135 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 AMPD3Q01432 767 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 TSPY1Q01534 308 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 CSTF1Q05048 431 aaKnown RBP19.7■□□□□ 0.74
USB1-213ENST00000566292 PKP1Q13835 747 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 ARHGAP15Q53QZ3 475 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 STXBP4Q6ZWJ1 553 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 TMEM150AQ86TG1 271 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 CBWD2Q8IUF1 395 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 YAF2Q8IY57 180 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 STKLD1Q8NE28 680 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 OR5B17Q8NGF7 314 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 FAM3CQ92520 227 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 PKMYT1Q99640 499 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 C7orf25Q9BPX7 421 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 ACBD6Q9BR61 282 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 PI4K2AQ9BTU6 479 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 TASP1Q9H6P5 420 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 DDX43Q9NXZ2 648 aaKnown RBP19.7■□□□□ 0.74
USB1-213ENST00000566292 HSPBP1Q9NZL4 362 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 PCDHB5Q9Y5E4 795 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 SNX9Q9Y5X1 595 aa19.7■□□□□ 0.74
USB1-213ENST00000566292 PTPRDP23468 1912 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 ANAPC1Q9H1A4 1944 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 ZNF233A6NK53 670 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 POLR2DO15514 142 aaKnown RBP19.69■□□□□ 0.74
USB1-213ENST00000566292 HCRTO43612 131 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 HMGA1P17096 107 aaKnown RBP19.69■□□□□ 0.74
USB1-213ENST00000566292 ACAT1P24752 427 aaKnown RBP19.69■□□□□ 0.74
USB1-213ENST00000566292 CASP1P29466 404 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 WEE1P30291 646 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 CDC25CP30307 473 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 EHHADHQ08426 723 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 MTAPQ13126 283 aa19.69■□□□□ 0.74
USB1-213ENST00000566292 CCDC142Q17RM4 750 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms