RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ELF1P32519 619 aa22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 NOP14P78316 857 aaKnown RBP22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 ADCY1Q08828 1119 aa22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 PPM1LQ5SGD2 360 aa22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 TMC5Q6UXY8 1006 aa22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 DCP1BQ8IZD4 617 aaKnown RBP22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 CCDC150Q8NCX0 1101 aa22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 PRKD2Q9BZL6 878 aa22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 PRKAG3Q9UGI9 489 aa22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 MUC3AQ02505 3323 aa22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 MTMR11A4FU01 709 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 PRRG1O14668 218 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 P4HA2O15460 535 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 OR4Q2P0C623 313 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 IL9P15248 144 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 FMO5P49326 533 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 INTS6LQ5JSJ4 861 aaKnown RBP22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 OSTM1Q86WC4 334 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 IRF2BP1Q8IU81 584 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 ZNF707Q96C28 371 aaPredicted RBP22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 CNOT6LQ96LI5 555 aaKnown RBP22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 TMEM209Q96SK2 561 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 RAB20Q9NX57 234 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 DOCK8Q8NF50 2099 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 VNN2O95498 520 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 NFE2Q16621 373 aaPredicted RBP22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 TPD52L1Q16890 204 aaPredicted RBP22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 ATAT1Q5SQI0 421 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 FAM114A1Q8IWE2 563 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 ENOX1Q8TC92 643 aaKnown RBP22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 PKMYT1Q99640 499 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 APOL5Q9BWW9 433 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 BCO2Q9BYV7 579 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 NIF3L1Q9GZT8 377 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 FAM124BQ9H5Z6 455 aaPredicted RBP22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 SMYD3Q9H7B4 428 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 CYP4F11Q9HBI6 524 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 CDH9Q9ULB4 789 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 POLIQ9UNA4 740 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 INSL5Q9Y5Q6 135 aa22.54■■□□□ 1.2
SHCBP1-205ENST00000566016 NOTCH4Q99466 2003 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 XYLBO75191 536 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 SEC24AO95486 1093 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 ASPAP45381 313 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 SKOR2Q2VWA4 1001 aaPredicted RBP22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 SLC39A12Q504Y0 691 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 SPPL2BQ8TCT7 592 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 SMG7Q92540 1137 aaKnown RBP22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 SEMA4DQ92854 862 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 MRPL45Q9BRJ2 306 aaKnown RBP22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 PI4K2AQ9BTU6 479 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 SNX25Q9H3E2 840 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 ABCB6Q9NP58 842 aa22.53■■□□□ 1.2
SHCBP1-205ENST00000566016 CLSTN1O94985 981 aa22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 LETM1O95202 739 aaPredicted RBP22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 GNL1P36915 607 aaPredicted RBP22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 TYRO3Q06418 890 aa22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 CETN1Q12798 172 aa22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 KCNH2Q12809 1159 aa22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 MAPRE1Q15691 268 aaKnown RBP22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 SPOPLQ6IQ16 392 aa22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 LRRTM3Q86VH5 581 aa22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 PGLYRP2Q96PD5 576 aa22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 SYT15Q9BQS2 421 aa22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 CYP3A43Q9HB55 503 aa22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 APOBEC3GQ9HC16 384 aaKnown RBP22.52■■□□□ 1.2
SHCBP1-205ENST00000566016 ACAT1P24752 427 aaKnown RBP22.51■■□□□ 1.19
SHCBP1-205ENST00000566016 INCA1Q0VD86 236 aa22.51■■□□□ 1.19
SHCBP1-205ENST00000566016 FAM171BQ6P995 826 aa22.51■■□□□ 1.19
SHCBP1-205ENST00000566016 ATAD1Q8NBU5 361 aa22.51■■□□□ 1.19
SHCBP1-205ENST00000566016 PHF7Q9BWX1 381 aaPredicted RBP22.51■■□□□ 1.19
SHCBP1-205ENST00000566016 YIPF1Q9Y548 306 aa22.51■■□□□ 1.19
SHCBP1-205ENST00000566016 LRG1P02750 347 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 AFPP02771 609 aaKnown RBP22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 LMO2P25791 158 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 DUSP4Q13115 394 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 PLD1Q13393 1074 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 CFAP221Q4G0U5 840 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 WDR44Q5JSH3 913 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 SCARA5Q6ZMJ2 495 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 C11orf57Q6ZUT1 292 aaPredicted RBP22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 ADHFE1Q8IWW8 467 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 OR6B3Q8NGW1 331 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 FUBP3Q96I24 572 aaKnown RBP eCLIP22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 CRISPLD1Q9H336 500 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 POMKQ9H5K3 350 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 WDR6Q9NNW5 1121 aaKnown RBP22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 CDH22Q9UJ99 828 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 NFE2L3Q9Y4A8 694 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 NME7Q9Y5B8 376 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 PCDHB5Q9Y5E4 795 aa22.5■■□□□ 1.19
SHCBP1-205ENST00000566016 TUFMP49411 452 aaKnown RBP22.49■■□□□ 1.19
SHCBP1-205ENST00000566016 ZP2Q05996 745 aa22.49■■□□□ 1.19
SHCBP1-205ENST00000566016 UNC93AQ86WB7 457 aa22.49■■□□□ 1.19
SHCBP1-205ENST00000566016 TTC39CQ8N584 583 aa22.49■■□□□ 1.19
SHCBP1-205ENST00000566016 FEZF2Q8TBJ5 459 aa22.49■■□□□ 1.19
SHCBP1-205ENST00000566016 ADAMTS19Q8TE59 1207 aa22.49■■□□□ 1.19
SHCBP1-205ENST00000566016 SDCBP2Q9H190 292 aa22.49■■□□□ 1.19
SHCBP1-205ENST00000566016 PIDD1Q9HB75 910 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms