RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PHACTR3Q96KR7 559 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 CAPNS2Q96L46 248 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 RSAD1Q9HA92 442 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 BCO1Q9HAY6 547 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 GJB4Q9NTQ9 266 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 LMBRD1Q9NUN5 540 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 RTEL1Q9NZ71 1219 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 L1RE1Q9UN81 338 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 SH3BP1Q9Y3L3 701 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 SOS1Q07889 1333 aaPredicted RBP5.02□□□□□ -1.61
LINC00561-201ENST00000565815 FAM227AF5H4B4 570 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 KIAA0391O15091 583 aaKnown RBP5.01□□□□□ -1.61
LINC00561-201ENST00000565815 CAND2O75155 1236 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 NPR1P16066 1061 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 HK1P19367 917 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 CHRNA5P30532 468 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 EPHX2P34913 555 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 WASP42768 502 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 AGFG1P52594 562 aaKnown RBP5.01□□□□□ -1.61
LINC00561-201ENST00000565815 HK3P52790 923 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 LONRF1Q17RB8 773 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 ANO6Q4KMQ2 910 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 CIAPIN1Q6FI81 312 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 USP50Q70EL3 339 aaPredicted RBP5.01□□□□□ -1.61
LINC00561-201ENST00000565815 TAX1BP1Q86VP1 789 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 SYT12Q8IV01 421 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 REXO1L1PQ8IX06 675 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 CNTROBQ8N137 903 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 NSUN7Q8NE18 718 aaKnown RBP5.01□□□□□ -1.61
LINC00561-201ENST00000565815 SHCBP1Q8NEM2 672 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 EXOC6Q8TAG9 804 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 FAM193BQ96PV7 902 aaPredicted RBP5.01□□□□□ -1.61
LINC00561-201ENST00000565815 KIF20BQ96Q89 1820 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 EPC1Q9H2F5 836 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 PCDH18Q9HCL0 1135 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 MAN1C1Q9NR34 630 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 C1orf112Q9NSG2 853 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 ABT1Q9ULW3 272 aaKnown RBP5.01□□□□□ -1.61
LINC00561-201ENST00000565815 DAAM1Q9Y4D1 1078 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 CCDC88AQ3V6T2 1871 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 CFAP69A5D8W1 941 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 CDHR4A6H8M9 788 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 CXorf49A8MYA2 514 aaPredicted RBP5.01□□□□□ -1.61
LINC00561-201ENST00000565815 DTNBO60941 627 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 PIK3CBP42338 1070 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 KCNC1P48547 511 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 PRIM2P49643 509 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 GJA9P57773 515 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 NKX6-1P78426 367 aaPredicted RBP5.01□□□□□ -1.61
LINC00561-201ENST00000565815 APBA1Q02410 837 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 C1orf141Q5JVX7 400 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 KIAA0319LQ8IZA0 1049 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 MASTLQ96GX5 879 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 TBCBQ99426 244 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 NEU1Q99519 415 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 ENKD1Q9H0I2 346 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 LANCL2Q9NS86 450 aa5.01□□□□□ -1.61
LINC00561-201ENST00000565815 PUF60Q9UHX1 559 aaKnown RBP5.01□□□□□ -1.61
LINC00561-201ENST00000565815 CDHR2Q9BYE9 1310 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 FYB1O15117 783 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 GRM6O15303 877 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 FOXS1O43638 330 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 ENDOD1O94919 500 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 SEMA5AQ13591 1074 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 KLHDC7AQ5VTJ3 777 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 ZNF529Q6P280 563 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 ZNF572Q7Z3I7 529 aaPredicted RBP5□□□□□ -1.61
LINC00561-201ENST00000565815 GPC2Q8N158 579 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 LMF1Q96S06 567 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 RPS6KC1Q96S38 1066 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 PPP1R16BQ96T49 567 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 MRI1Q9BV20 369 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 SLC6A15Q9H2J7 730 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 AGAP1Q9UPQ3 857 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 SLC4A7Q9Y6M7 1214 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 TRPM7Q96QT4 1865 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 TMEM233B4DJY2 109 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 TBX3O15119 743 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 MATN4O95460 622 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 ZSCAN22P10073 491 aaPredicted RBP5□□□□□ -1.61
LINC00561-201ENST00000565815 RAC3P60763 192 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 MEF2AQ02078 507 aaPredicted RBP5□□□□□ -1.61
LINC00561-201ENST00000565815 NFIXQ14938 502 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 ZMAT1Q5H9K5 638 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 MAEAQ7L5Y9 396 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 TESK2Q96S53 571 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 TMEM60Q9H2L4 133 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 PPP4R1LQ9P1A2 415 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 TAGLN3Q9UI15 199 aa5□□□□□ -1.61
LINC00561-201ENST00000565815 AFDNP55196 1824 aaKnown RBP4.99□□□□□ -1.61
LINC00561-201ENST00000565815 CARMIL3Q8ND23 1372 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 FAM171A2A8MVW0 826 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 NCK2O43639 380 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 PQBP1O60828 265 aaKnown RBP4.99□□□□□ -1.61
LINC00561-201ENST00000565815 CR2P20023 1033 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 PRDX5P30044 214 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 FOXL1Q12952 345 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 PKN1Q16512 942 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 TTC7BQ86TV6 843 aa4.99□□□□□ -1.61
LINC00561-201ENST00000565815 CMTM4Q8IZR5 234 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms