RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 THG1LQ9NWX6 298 aaKnown RBP12.53□□□□□ -0.4
NSMCE1-209ENST00000565384 C2CD2Q9Y426 696 aa12.53□□□□□ -0.4
NSMCE1-209ENST00000565384 TISP43B9A030 160 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 ANKRD63C9JTQ0 380 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 CYB561D2O14569 222 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 EXTL3O43909 919 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 GDF9O60383 454 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 FOXD2O60548 495 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 TBCAO75347 108 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 KRT37O76014 449 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 HAPLN1P10915 354 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 GJB2P29033 226 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 NMT1P30419 496 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 ABCD1P33897 745 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 GTF2BQ00403 316 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 KARSQ15046 597 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 PTPAQ15257 358 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 ITPRIPL2Q3MIP1 535 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 ADALQ6DHV7 355 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 LRRTM3Q86VH5 581 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 THEM5Q8N1Q8 247 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 RASSF8Q8NHQ8 419 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 SPPL2BQ8TCT7 592 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 C2orf15Q8WU43 125 aaKnown RBP12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 RAD54LQ92698 747 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 ABI2Q9NYB9 513 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 ZMYM5Q9UJ78 669 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 KIF26AQ9ULI4 1882 aaPredicted RBP12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 FRYLO94915 3013 aa12.52□□□□□ -0.41
NSMCE1-209ENST00000565384 PLCG1P19174 1290 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 GRIN1Q05586 938 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 SMARCB1Q12824 385 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 ZC2HC1CQ53FD0 456 aaPredicted RBP12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 WSCD1Q658N2 575 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 SLFN12LQ6IEE8 588 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 EFCAB13Q8IY85 973 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 CMTM8Q8IZV2 173 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 FAM83CQ9BQN1 747 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 HPS4Q9NQG7 708 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 GKN1Q9NS71 199 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 DPP3Q9NY33 737 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 AGO2Q9UKV8 859 aaKnown RBP12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 ANK1P16157 1881 aa12.51□□□□□ -0.41
NSMCE1-209ENST00000565384 AXIN1O15169 862 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 KCNA4P22459 653 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 DDX6P26196 483 aaKnown RBP eCLIP12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 AVPR1AP37288 418 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 PXNP49023 591 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 NLRP12P59046 1061 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 GRSF1Q12849 480 aaKnown RBP eCLIP12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 BFSP1Q12934 665 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 RUNX3Q13761 415 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 RABEP1Q15276 862 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 SV2CQ496J9 727 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 AASDHQ4L235 1098 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 TMEM196Q5HYL7 178 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 TRIM68Q6AZZ1 485 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 FSTL4Q6MZW2 842 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 TMEM150AQ86TG1 271 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 DCP1BQ8IZD4 617 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 MAB21L3Q8N8X9 362 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 STKLD1Q8NE28 680 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 GAB3Q8WWW8 586 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 LARP4BQ92615 738 aaKnown RBP12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 USP13Q92995 863 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 CHFRQ96EP1 664 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 TMX3Q96JJ7 454 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 ST6GALNAC4Q9H4F1 302 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 EBF3Q9H4W6 596 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 KIF9Q9HAQ2 790 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 CCL26Q9Y258 94 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 PCDHB5Q9Y5E4 795 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 STYXL1Q9Y6J8 313 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 SCN1AP35498 2009 aa12.5□□□□□ -0.41
NSMCE1-209ENST00000565384 OTOL1A6NHN0 477 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 KPNA7A9QM74 516 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 ATG13O75143 517 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 RPP40O75818 363 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 EPN2O95208 641 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 BMP15O95972 392 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 F11P03951 625 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 CCDC192P0DO97 292 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 HMGA1P17096 107 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 LONP1P36776 959 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 GPR15P49685 360 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 POU5F1Q01860 360 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 CCDC6Q16204 474 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 TXNDC8Q6A555 127 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 IL31Q6EBC2 164 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 CRELD2Q6UXH1 353 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 CACNA2D4Q7Z3S7 1137 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 KRI1Q8N9T8 703 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 C12orf50Q8NA57 414 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 POMGNT1Q8WZA1 660 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 DDX1Q92499 740 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 LOXL4Q96JB6 756 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 ZNF560Q96MR9 790 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 PI4K2AQ9BTU6 479 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms