RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CHMP2BQ9UQN3 213 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SH3BP1Q9Y3L3 701 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MAP3K7O43318 606 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 HARSP12081 509 aaKnown RBP21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 GLRA2P23416 452 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ACOT2P49753 483 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ARL4CP56559 192 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 WDR72Q3MJ13 1102 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CFAP157Q5JU67 520 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 IRGCQ6NXR0 463 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CCDC62Q6P9F0 684 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PALM2Q8IXS6 379 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 LRRN4Q8WUT4 740 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 JDP2Q8WYK2 163 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 STK24Q9Y6E0 443 aa21.57■■□□□ 1.04
MAP1LC3B-206ENST00000564844 TJP3O95049 919 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CENPCQ03188 943 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MAMLD1Q13495 774 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 TCEAL1Q15170 157 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 IZUMO2Q6UXV1 221 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CENPUQ71F23 418 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ATRNL1Q5VV63 1379 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CLUHO75153 1309 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MEI4A8MW99 385 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 E7ENQ6 273 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 HNRNPDLO14979 420 aaKnown RBP21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 WNT7BP56706 349 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 HIF1AQ16665 826 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 BBOF1Q8ND07 529 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 EPAS1Q99814 870 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ZWILCHQ9H900 591 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 C1orf112Q9NSG2 853 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PCDHB4Q9Y5E5 795 aa21.56■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MYCLP12524 364 aaPredicted RBP21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 YWHABP31946 246 aaKnown RBP21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 DGKZQ13574 1117 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MFN1Q8IWA4 741 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 EFCAB3Q8N7B9 438 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 FBXO36Q8NEA4 188 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 USP6NLQ92738 828 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 AGBL1Q96MI9 1066 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 TMEM8AQ9HCN3 771 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PPARGC1AQ9UBK2 798 aaKnown RBP21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 TCEAL9Q9UHQ7 104 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 FCHO1O14526 889 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 LPXNO60711 386 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 STK10O94804 968 aaKnown RBP21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 RTN3O95197 1032 aaPredicted RBP21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 LBRQ14739 615 aaKnown RBP21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 C15orf52Q6ZUT6 534 aaKnown RBP21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SH3TC2Q8TF17 1288 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 TUBGCP5Q96RT8 1024 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CSRNP1Q96S65 589 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CYLDQ9NQC7 956 aa21.55■■□□□ 1.04
MAP1LC3B-206ENST00000564844 GEMIN4P57678 1058 aaKnown RBP21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 USP4Q13107 963 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SGSM1Q2NKQ1 1148 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 TMEM179Q6ZVK1 233 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SLC13A1Q9BZW2 595 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 P4HA2O15460 535 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 RNF8O76064 485 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 GSTT1P30711 240 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MCEEQ96PE7 176 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SMYD3Q9H7B4 428 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 RABGEF1Q9UJ41 708 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 UBE4BO95155 1302 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 hCG_2014768A0A024R1R8 64 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ATP2A1O14983 1001 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 AVILO75366 819 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PYGBP11216 843 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 GCLCP48506 637 aaPredicted RBP21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 BASP1P80723 227 aaKnown RBP21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CDAN1Q8IWY9 1227 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CTAGE3PQ8IX95 158 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ZNF516Q92618 1163 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PTCD3Q96EY7 689 aaKnown RBP21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SYNCQ9H7C4 482 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 TBX20Q9UMR3 447 aa21.54■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MAP3K6O95382 1288 aa21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 MT-ND3P03897 115 aa21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ALDH18A1P54886 795 aaKnown RBP21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 RASA2Q15283 850 aa21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 TREML1Q86YW5 311 aa21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 BSNDQ8WZ55 320 aa21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 KCNK13Q9HB14 408 aa21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 EIF2AK2P19525 551 aaKnown RBP21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 BRDTQ58F21 947 aaPredicted RBP21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CYP4A22Q5TCH4 519 aa21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 DCUN1D2Q6PH85 259 aa21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 RIBC1Q8N443 379 aaPredicted RBP21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SERAC1Q96JX3 654 aa21.53■■□□□ 1.04
MAP1LC3B-206ENST00000564844 CYB561D2O14569 222 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 SLC1A1P43005 524 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 NPTX2P47972 431 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 PSMC5P62195 406 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 LIN9Q5TKA1 542 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 B4GALNT2Q8NHY0 566 aa21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 ZNF184Q99676 751 aaPredicted RBP21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 UBE2OQ9C0C9 1292 aaKnown RBP21.52■■□□□ 1.04
MAP1LC3B-206ENST00000564844 COL20A1Q9P218 1284 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms