RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 AGAP1Q9UPQ3 857 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 R3HCC1Q9Y3T6 440 aaKnown RBP16.16■□□□□ 0.18
SPG7-210ENST00000564409 PCDHB5Q9Y5E4 795 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 PCDHGA2Q9Y5H1 932 aa16.16■□□□□ 0.18
SPG7-210ENST00000564409 ZNF638Q14966 1978 aaKnown RBP16.16■□□□□ 0.18
SPG7-210ENST00000564409 DPYSL4O14531 572 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 HAPLN1P10915 354 aaPredicted RBP16.15■□□□□ 0.18
SPG7-210ENST00000564409 GJA1P17302 382 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 CD72P21854 359 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 GABRR2P28476 465 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 PPP2R5DQ14738 602 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 ARHGAP29Q52LW3 1261 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 DPH6Q7L8W6 267 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 ARID3BQ8IVW6 561 aaPredicted RBP16.15■□□□□ 0.18
SPG7-210ENST00000564409 MAML2Q8IZL2 1156 aaPredicted RBP16.15■□□□□ 0.18
SPG7-210ENST00000564409 TTC9BQ8N6N2 239 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 C1orf127Q8N9H9 656 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 CSGALNACT1Q8TDX6 532 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 FAM3CQ92520 227 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 CBWD1Q9BRT8 395 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 TRIM9Q9C026 710 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 ATXN3LQ9H3M9 355 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 TASP1Q9H6P5 420 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 C8orf33Q9H7E9 229 aaPredicted RBP16.15■□□□□ 0.18
SPG7-210ENST00000564409 TFIP11Q9UBB9 837 aaKnown RBP16.15■□□□□ 0.18
SPG7-210ENST00000564409 EP300Q09472 2414 aaPredicted RBP16.15■□□□□ 0.18
SPG7-210ENST00000564409 GVINP1Q7Z2Y8 2422 aa16.15■□□□□ 0.18
SPG7-210ENST00000564409 DMDP11532 3685 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 ZNF233A6NK53 670 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 ARNTLO00327 626 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 NRG2O14511 850 aaPredicted RBP16.14■□□□□ 0.17
SPG7-210ENST00000564409 KINO60870 393 aaKnown RBP16.14■□□□□ 0.17
SPG7-210ENST00000564409 PRPF6O94906 941 aaKnown RBP16.14■□□□□ 0.17
SPG7-210ENST00000564409 ITGB3P05106 788 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 HSP90AA1P07900 732 aaKnown RBP16.14■□□□□ 0.17
SPG7-210ENST00000564409 TMEM191BP0C7N4 346 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 DDX6P26196 483 aaKnown RBP eCLIP16.14■□□□□ 0.17
SPG7-210ENST00000564409 POLR2BP30876 1174 aaKnown RBP16.14■□□□□ 0.17
SPG7-210ENST00000564409 LHX1P48742 406 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 PLCB2Q00722 1185 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 MYL7Q01449 175 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 MYO1EQ12965 1108 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 FZD5Q13467 585 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 GPR158Q5T848 1215 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 LRRTM3Q86VH5 581 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 ZNF687Q8N1G0 1237 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 PDCL2Q8N4E4 241 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 CSGALNACT2Q8N6G5 542 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 TOP6BLQ8N6T0 577 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 ATRIPQ8WXE1 791 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 ANKRD36BP1Q96IX9 119 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 C7orf25Q9BPX7 421 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 CHRDQ9H2X0 955 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 PIAS3Q9Y6X2 628 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 R4GN57 208 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 UBE4BO95155 1302 aa16.14■□□□□ 0.17
SPG7-210ENST00000564409 SHISA7A6NL88 538 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 CSH1P0DML2 217 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 CSH2P0DML3 217 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 ZSCAN22P10073 491 aaPredicted RBP16.13■□□□□ 0.17
SPG7-210ENST00000564409 ATF6P18850 670 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 PCSK1P29120 753 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 NRLP54845 237 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 RPL10AP62906 217 aaKnown RBP16.13■□□□□ 0.17
SPG7-210ENST00000564409 FOXK2Q01167 660 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 DUOXA2Q1HG44 320 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 CXorf38Q8TB03 319 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 ZNF507Q8TCN5 953 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 NELL1Q92832 810 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 MKNK1Q9BUB5 465 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 FGFBP2Q9BYJ0 223 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 PDE11AQ9HCR9 933 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 PRMT8Q9NR22 394 aaPredicted RBP16.13■□□□□ 0.17
SPG7-210ENST00000564409 INTS13Q9NVM9 706 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 THG1LQ9NWX6 298 aaKnown RBP16.13■□□□□ 0.17
SPG7-210ENST00000564409 ZSCAN32Q9NX65 697 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 ABI2Q9NYB9 513 aaPredicted RBP16.13■□□□□ 0.17
SPG7-210ENST00000564409 CGNQ9P2M7 1197 aaKnown RBP16.13■□□□□ 0.17
SPG7-210ENST00000564409 UXTQ9UBK9 157 aaPredicted RBP16.13■□□□□ 0.17
SPG7-210ENST00000564409 CFAP45Q9UL16 551 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 L1RE1Q9UN81 338 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 COL4A3Q01955 1670 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 VPS13AQ96RL7 3174 aa16.13■□□□□ 0.17
SPG7-210ENST00000564409 OTOGLQ3ZCN5 2332 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 CFAP54Q96N23 3096 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 GOLGA8IPA6NC78 632 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 GOLGA8JA6NMD2 632 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 SOAT2O75908 522 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 TNNC2P02585 160 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 ASIC1P78348 528 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 CSTF1Q05048 431 aaKnown RBP16.12■□□□□ 0.17
SPG7-210ENST00000564409 BFSP1Q12934 665 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 LRRC32Q14392 662 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 FAM26FQ5R3K3 315 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 EPM2AIP1Q7L775 607 aaPredicted RBP16.12■□□□□ 0.17
SPG7-210ENST00000564409 RALGPS2Q86X27 583 aaPredicted RBP16.12■□□□□ 0.17
SPG7-210ENST00000564409 CELF5Q8N6W0 485 aaKnown RBP16.12■□□□□ 0.17
SPG7-210ENST00000564409 ZBTB44Q8NCP5 570 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 ZSWIM2Q8NEG5 633 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms