RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ACAT1P24752 427 aaKnown RBP19.02■□□□□ 0.64
NME3-205ENST00000563854 HOXD13P35453 343 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 CYP2J2P51589 502 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 RBP5P82980 135 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 CYP4F8P98187 520 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 ARHGAP15Q53QZ3 475 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 GPR158Q5T848 1215 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 RESP18Q5W5W9 173 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 UNC13DQ70J99 1090 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 CEP57L1Q8IYX8 460 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 LRRC52Q8N7C0 313 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 RDH13Q8NBN7 331 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 SPPL2BQ8TCT7 592 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 DNASE1L2Q92874 299 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 NKD2Q969F2 451 aaPredicted RBP19.02■□□□□ 0.64
NME3-205ENST00000563854 GCNAQ96QF7 691 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 PI4K2AQ9BTU6 479 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 DDX23Q9BUQ8 820 aaKnown RBP19.02■□□□□ 0.64
NME3-205ENST00000563854 GPR88Q9GZN0 384 aa19.02■□□□□ 0.64
NME3-205ENST00000563854 SPATA6Q9NWH7 488 aaPredicted RBP19.02■□□□□ 0.64
NME3-205ENST00000563854 DDX43Q9NXZ2 648 aaKnown RBP19.02■□□□□ 0.64
NME3-205ENST00000563854 NDRG2Q9UN36 371 aaKnown RBP19.02■□□□□ 0.64
NME3-205ENST00000563854 PRR23AA6NEV1 266 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 PROB1E7EW31 1015 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 ZNF263O14978 683 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 CLIC2O15247 247 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 FGF19O95750 216 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 TARSP26639 723 aaKnown RBP19.01■□□□□ 0.63
NME3-205ENST00000563854 ATL3Q6DD88 541 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 ZNF852Q6ZMS4 543 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 GAREM2Q75VX8 874 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 C1orf210Q8IVY1 113 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 ADGRF2Q8IZF7 708 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 STKLD1Q8NE28 680 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 OR5B17Q8NGF7 314 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 C2orf15Q8WU43 125 aaKnown RBP19.01■□□□□ 0.63
NME3-205ENST00000563854 DEPDC1BQ8WUY9 529 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 IRF7Q92985 503 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 SLC39A2Q9NP94 309 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 AGPAT3Q9NRZ7 376 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 TMLHEQ9NVH6 421 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 INTS13Q9NVM9 706 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 HSFX1Q9UBD0 423 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 SIX4Q9UIU6 781 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 PCDHB5Q9Y5E4 795 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 R4GN57 208 aa19.01■□□□□ 0.63
NME3-205ENST00000563854 DPYSL4O14531 572 aa19■□□□□ 0.63
NME3-205ENST00000563854 PRPF40AO75400 957 aaKnown RBP19■□□□□ 0.63
NME3-205ENST00000563854 DLATP10515 647 aaKnown RBP19■□□□□ 0.63
NME3-205ENST00000563854 HAPLN1P10915 354 aaPredicted RBP19■□□□□ 0.63
NME3-205ENST00000563854 GPR15P49685 360 aa19■□□□□ 0.63
NME3-205ENST00000563854 MYL7Q01449 175 aa19■□□□□ 0.63
NME3-205ENST00000563854 SMARCB1Q12824 385 aa19■□□□□ 0.63
NME3-205ENST00000563854 CUL4BQ13620 913 aa19■□□□□ 0.63
NME3-205ENST00000563854 CNNM4Q6P4Q7 775 aa19■□□□□ 0.63
NME3-205ENST00000563854 EPM2AIP1Q7L775 607 aaPredicted RBP19■□□□□ 0.63
NME3-205ENST00000563854 ZNF507Q8TCN5 953 aa19■□□□□ 0.63
NME3-205ENST00000563854 RSPRY1Q96DX4 576 aa19■□□□□ 0.63
NME3-205ENST00000563854 TRPV4Q9HBA0 871 aa19■□□□□ 0.63
NME3-205ENST00000563854 SERTAD1Q9UHV2 236 aa19■□□□□ 0.63
NME3-205ENST00000563854 UBE4BO95155 1302 aa19■□□□□ 0.63
NME3-205ENST00000563854 TGFB1I1O43294 461 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 HCRTO43612 131 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 MYO1EQ12965 1108 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 SURF1Q15526 300 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 SNRNP35Q16560 246 aaKnown RBP18.99■□□□□ 0.63
NME3-205ENST00000563854 CCDC142Q17RM4 750 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 SDHAF4Q5VUM1 108 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 HS2ST1Q7LGA3 356 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 OSTM1Q86WC4 334 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 ARID3BQ8IVW6 561 aaPredicted RBP18.99■□□□□ 0.63
NME3-205ENST00000563854 MFSD6LQ8IWD5 586 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 TMEM86AQ8N2M4 240 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 CXorf38Q8TB03 319 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 SCFD1Q8WVM8 642 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 CCDC127Q96BQ5 260 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 HPDLQ96IR7 371 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 CHAMP1Q96JM3 812 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 KIAA1586Q9HCI6 787 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 MAGED2Q9UNF1 606 aaPredicted RBP18.99■□□□□ 0.63
NME3-205ENST00000563854 MRPS17Q9Y2R5 130 aaKnown RBP18.99■□□□□ 0.63
NME3-205ENST00000563854 PIAS3Q9Y6X2 628 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 USP34Q70CQ2 3546 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 TICRRQ7Z2Z1 1910 aa18.99■□□□□ 0.63
NME3-205ENST00000563854 ZFHX2Q9C0A1 2572 aaPredicted RBP18.99■□□□□ 0.63
NME3-205ENST00000563854 LAMTOR5O43504 91 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 CLSTN1O94985 981 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 SP9P0CG40 484 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 TNNI1P19237 187 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 CDC25CP30307 473 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 NFE2Q16621 373 aaPredicted RBP18.98■□□□□ 0.63
NME3-205ENST00000563854 DUOXA2Q1HG44 320 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 INTS6LQ5JSJ4 861 aaKnown RBP18.98■□□□□ 0.63
NME3-205ENST00000563854 WDR49Q8IV35 697 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 CSGALNACT1Q8TDX6 532 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 E2F7Q96AV8 911 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 FNBP1Q96RU3 617 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 MKNK1Q9BUB5 465 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 OSBPL6Q9BZF3 934 aa18.98■□□□□ 0.63
NME3-205ENST00000563854 GDAP2Q9NXN4 497 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms