RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 GKN1Q9NS71 199 aa11.29□□□□□ -0.6
SF3B3-204ENST00000563739 KLK13Q9UKR3 277 aa11.29□□□□□ -0.6
SF3B3-204ENST00000563739 APC2O95996 2303 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 OR6C75A6NL08 312 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 PP2D1A8MPX8 630 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 SLC16A4O15374 487 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
SF3B3-204ENST00000563739 HYAL3O43820 417 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-204ENST00000563739 F11P03951 625 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 ADRB2P07550 413 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 OR52Z1P0C646 297 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 TYMPP19971 482 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 CSRP1P21291 193 aaKnown RBP11.28□□□□□ -0.6
SF3B3-204ENST00000563739 MUTP22033 750 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 EPHB3P54753 998 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 CREB5Q02930 508 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 MCL1Q07820 350 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 MESP2Q0VG99 397 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 PLD1Q13393 1074 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 RUNX3Q13761 415 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 MYBPC2Q14324 1141 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 NOLC1Q14978 699 aaKnown RBP eCLIP11.28□□□□□ -0.63e-8■■■□□ 18.2
SF3B3-204ENST00000563739 IL17AQ16552 155 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 CCDC142Q17RM4 750 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 KIAA1211LQ6NV74 962 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 LRRTM3Q86VH5 581 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 TMEM161BQ8NDZ6 487 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 DEFB124Q8NES8 71 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 RPLP0P6Q8NHW5 317 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 LRRC15Q8TF66 581 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 ZCCHC14Q8WYQ9 949 aaKnown RBP11.28□□□□□ -0.6
SF3B3-204ENST00000563739 IFT74Q96LB3 600 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 TMLHEQ9NVH6 421 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 EBF1Q9UH73 591 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 INVSQ9Y283 1065 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 ASB3Q9Y575 518 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 GON4LQ3T8J9 2241 aa11.28□□□□□ -0.6
SF3B3-204ENST00000563739 TMEM8BA6NDV4 472 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 REC8O95072 547 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 CAVIN2O95810 425 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 MAPTP10636 758 aaKnown RBP11.27□□□□□ -0.61
SF3B3-204ENST00000563739 XBP1P17861 261 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 GJA4P35212 333 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 GPR15P49685 360 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.611e-13■■■■□ 22.5
SF3B3-204ENST00000563739 GALK1P51570 392 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 FAM193AP78312 1265 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 USP4Q13107 963 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 DMC1Q14565 340 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.61
SF3B3-204ENST00000563739 SCARA3Q6AZY7 606 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 OVOS1Q6IE37 1185 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 RINT1Q6NUQ1 792 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 SLC39A4Q6P5W5 647 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 SYT13Q7L8C5 426 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 SFTPA1Q8IWL2 248 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 CMTM8Q8IZV2 173 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 CAMKK1Q8N5S9 505 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 SLC22A12Q96S37 553 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 TPSD1Q9BZJ3 242 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 ZCWPW1Q9H0M4 648 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 DDX19AQ9NUU7 478 aaKnown RBP11.27□□□□□ -0.61
SF3B3-204ENST00000563739 PPP4R2Q9NY27 417 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 ANKFY1Q9P2R3 1169 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 LHX6Q9UPM6 363 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 SLC8A2Q9UPR5 921 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 PTPRBP23467 1997 aa11.27□□□□□ -0.61
SF3B3-204ENST00000563739 MYOFQ9NZM1 2061 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 CCDC169A6NNP5 214 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 SOBPA7XYQ1 873 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 SFI1A8K8P3 1242 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 LACTBL1A8MY62 500 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 TOM1L1O75674 476 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 CYP11A1P05108 521 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 CEACAM1P13688 526 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 CCT6AP40227 531 aaKnown RBP11.26□□□□□ -0.61
SF3B3-204ENST00000563739 NLRP12P59046 1061 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 LILRA4P59901 499 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 IRX4P78413 519 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 GUCY1B3Q02153 619 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 ZNF174Q15697 407 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 ZNF77Q15935 545 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 FRMD1Q8N878 549 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 IGSF22Q8N9C0 903 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 OLIG1Q8TAK6 271 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 FAM200AQ8TCP9 573 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 GIPC2Q8TF65 315 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 SENP8Q96LD8 212 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 NTPCRQ9BSD7 190 aaKnown RBP11.26□□□□□ -0.61
SF3B3-204ENST00000563739 KMT5AQ9NQR1 393 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 HSFX1Q9UBD0 423 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 DAXXQ9UER7 740 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-204ENST00000563739 KIAA1024Q9UPX6 916 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 NEUROG3Q9Y4Z2 214 aa11.26□□□□□ -0.61
SF3B3-204ENST00000563739 ANO9A1A5B4 782 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms