RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 KRT37O76014 449 aa20.19■□□□□ 0.82
NME3-204ENST00000563498 CYP4F8P98187 520 aa20.19■□□□□ 0.82
NME3-204ENST00000563498 GTF2BQ00403 316 aa20.19■□□□□ 0.82
NME3-204ENST00000563498 TAF12Q16514 161 aa20.19■□□□□ 0.82
NME3-204ENST00000563498 ERICH6BQ5W0A0 696 aa20.19■□□□□ 0.82
NME3-204ENST00000563498 CMTM8Q8IZV2 173 aa20.19■□□□□ 0.82
NME3-204ENST00000563498 THEM5Q8N1Q8 247 aa20.19■□□□□ 0.82
NME3-204ENST00000563498 FAM83CQ9BQN1 747 aa20.19■□□□□ 0.82
NME3-204ENST00000563498 SLC46A2Q9BY10 475 aa20.19■□□□□ 0.82
NME3-204ENST00000563498 CYB561D2O14569 222 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 GDF9O60383 454 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 ATG13O75143 517 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 HAPLN1P10915 354 aaPredicted RBP20.18■□□□□ 0.82
NME3-204ENST00000563498 DDX6P26196 483 aaKnown RBP eCLIP20.18■□□□□ 0.82
NME3-204ENST00000563498 UBA7P41226 1012 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 TAF6P49848 677 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 LIMK1P53667 647 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 TMEM196Q5HYL7 178 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 SLFN12LQ6IEE8 588 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 GAB3Q8WWW8 586 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 FIZ1Q96SL8 496 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 BLOC1S4Q9NUP1 217 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 STYXL1Q9Y6J8 313 aa20.18■□□□□ 0.82
NME3-204ENST00000563498 RALGAPA1Q6GYQ0 2036 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 EXTL3O43909 919 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 AVPR1AP37288 418 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 ACOT2P49753 483 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 GRSF1Q12849 480 aaKnown RBP eCLIP20.17■□□□□ 0.82
NME3-204ENST00000563498 RUNX3Q13761 415 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 LRRTM3Q86VH5 581 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 LRRC15Q8TF66 581 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 PYM1Q9BRP8 204 aaKnown RBP20.17■□□□□ 0.82
NME3-204ENST00000563498 SMG9Q9H0W8 520 aaKnown RBP20.17■□□□□ 0.82
NME3-204ENST00000563498 ST6GALNAC4Q9H4F1 302 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 KIF9Q9HAQ2 790 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 GKN1Q9NS71 199 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 ANK1P16157 1881 aa20.17■□□□□ 0.82
NME3-204ENST00000563498 TRDMT1O14717 391 aaKnown RBP20.16■□□□□ 0.82
NME3-204ENST00000563498 TBCAO75347 108 aaKnown RBP20.16■□□□□ 0.82
NME3-204ENST00000563498 RPP40O75818 363 aaKnown RBP20.16■□□□□ 0.82
NME3-204ENST00000563498 AKAP3O75969 853 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 KRT18P05783 430 aaKnown RBP20.16■□□□□ 0.82
NME3-204ENST00000563498 RAP1GAPP47736 663 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 NLRP12P59046 1061 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 AMPD2Q01433 879 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 DHX8Q14562 1220 aaKnown RBP20.16■□□□□ 0.82
NME3-204ENST00000563498 WSCD1Q658N2 575 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 ADALQ6DHV7 355 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 CACNA2D4Q7Z3S7 1137 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 TMEM150AQ86TG1 271 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 DCP1BQ8IZD4 617 aaKnown RBP20.16■□□□□ 0.82
NME3-204ENST00000563498 GIPC2Q8TF65 315 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 HPS4Q9NQG7 708 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 DPP3Q9NY33 737 aa20.16■□□□□ 0.82
NME3-204ENST00000563498 GREB1Q4ZG55 1949 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 SCN1AP35498 2009 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 ANKRD63C9JTQ0 380 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 H3BQV1 296 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 EPN2O95208 641 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 F11P03951 625 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 ZNF806P0C7X5 589 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 HMGA1P17096 107 aaKnown RBP20.15■□□□□ 0.82
NME3-204ENST00000563498 HOXC13P31276 330 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 ST3GAL2Q16842 350 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 IL31Q6EBC2 164 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 FSTL4Q6MZW2 842 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 PKN3Q6P5Z2 889 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 NT5DC4Q86YG4 428 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 CAMKK1Q8N5S9 505 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 RAD54LQ92698 747 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 USP13Q92995 863 aaPredicted RBP20.15■□□□□ 0.82
NME3-204ENST00000563498 CHFRQ96EP1 664 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 ZHX3Q9H4I2 956 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 TDP1Q9NUW8 608 aa20.15■□□□□ 0.82
NME3-204ENST00000563498 ABI2Q9NYB9 513 aaPredicted RBP20.15■□□□□ 0.82
NME3-204ENST00000563498 AGO2Q9UKV8 859 aaKnown RBP20.15■□□□□ 0.82
NME3-204ENST00000563498 CHD8Q9HCK8 2581 aa20.14■□□□□ 0.82
NME3-204ENST00000563498 KPNA7A9QM74 516 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 BMP15O95972 392 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 PLCG1P19174 1290 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 NMT1P30419 496 aaKnown RBP20.14■□□□□ 0.81
NME3-204ENST00000563498 LONP1P36776 959 aaKnown RBP20.14■□□□□ 0.81
NME3-204ENST00000563498 BFSP1Q12934 665 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 MCM6Q14566 821 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 ZNF268Q14587 947 aaPredicted RBP20.14■□□□□ 0.81
NME3-204ENST00000563498 NFE2Q16621 373 aaPredicted RBP20.14■□□□□ 0.81
NME3-204ENST00000563498 SV2CQ496J9 727 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 AASDHQ4L235 1098 aaPredicted RBP20.14■□□□□ 0.81
NME3-204ENST00000563498 MAB21L3Q8N8X9 362 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 C12orf50Q8NA57 414 aaPredicted RBP20.14■□□□□ 0.81
NME3-204ENST00000563498 ARRDC1-AS1Q9H2J1 176 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 EBF3Q9H4W6 596 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 SLC8A2Q9UPR5 921 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 CCL26Q9Y258 94 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 PCDHB5Q9Y5E4 795 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 PCDHGA5Q9Y5G8 931 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 DENND4CQ5VZ89 1909 aa20.14■□□□□ 0.81
NME3-204ENST00000563498 OTOL1A6NHN0 477 aaPredicted RBP20.13■□□□□ 0.81
NME3-204ENST00000563498 TISP43B9A030 160 aa20.13■□□□□ 0.81
NME3-204ENST00000563498 TM4SF5O14894 197 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms