RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 C1orf228Q6PIY5 440 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 PRR23BQ6ZRT6 265 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 DYMQ7RTS9 669 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 TMEM150AQ86TG1 271 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 RALGPS2Q86X27 583 aaPredicted RBP18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 SFR1Q86XK3 245 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 ZSWIM2Q8NEG5 633 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 RASSF8Q8NHQ8 419 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 FAM200AQ8TCP9 573 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 BPIFB1Q8TDL5 484 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 TMLHEQ9NVH6 421 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 DSEQ9UL01 958 aa18.15■□□□□ 0.5
HDGFL3-203ENST00000563404 PRR5-ARHGAP8B1AHC4 643 aa18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 BMP15O95972 392 aa18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 HAPLN1P10915 354 aaPredicted RBP18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 ARHGAP8P85298 464 aa18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 PTPAQ15257 358 aa18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 DGKKQ5KSL6 1271 aa18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 SLFN12LQ6IEE8 588 aa18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 BRAPQ7Z569 592 aa18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 METTL23Q86XA0 190 aa18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 CLIC4Q9Y696 253 aa18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.14■□□□□ 0.49
HDGFL3-203ENST00000563404 SPTBN2O15020 2390 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 DCDC2BA2VCK2 349 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 MYMKA6NI61 221 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 HMGA1P17096 107 aaKnown RBP18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 CDC25CP30307 473 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 ABCD1P33897 745 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 GPR15P49685 360 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 POU5F1Q01860 360 aaKnown RBP18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 SIM2Q14190 667 aaPredicted RBP18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 VEPH1Q14D04 833 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 PKN3Q6P5Z2 889 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 THEM5Q8N1Q8 247 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 KRI1Q8N9T8 703 aaKnown RBP18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 STKLD1Q8NE28 680 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 RIN3Q8TB24 985 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 SPPL2BQ8TCT7 592 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 C2orf15Q8WU43 125 aaKnown RBP18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 POMGNT1Q8WZA1 660 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 CHFRQ96EP1 664 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 FAM84AQ96KN4 292 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 ABI2Q9NYB9 513 aaPredicted RBP18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 CDV3Q9UKY7 258 aaKnown RBP18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 RAB23Q9ULC3 237 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 CCL26Q9Y258 94 aa18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 KIF26AQ9ULI4 1882 aaPredicted RBP18.13■□□□□ 0.49
HDGFL3-203ENST00000563404 KPNA7A9QM74 516 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 F11P03951 625 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 RETP07949 1114 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 SDHBP21912 280 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 MCM2P49736 904 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 HEATR6Q6AI08 1181 aaKnown RBP18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 LONP2Q86WA8 852 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 CMTM8Q8IZV2 173 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 DNAJC19Q96DA6 116 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 CLIC6Q96NY7 704 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 FAM83CQ9BQN1 747 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 HPS4Q9NQG7 708 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 GKN1Q9NS71 199 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 TBC1D7Q9P0N9 293 aa18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 FBXO2Q9UK22 296 aaPredicted RBP18.12■□□□□ 0.49
HDGFL3-203ENST00000563404 OTOL1A6NHN0 477 aaPredicted RBP18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 CASP5P51878 434 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 NLRP12P59046 1061 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 PLCB2Q00722 1185 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 SMARCB1Q12824 385 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 ITPRIPL2Q3MIP1 535 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 SV2CQ496J9 727 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 SDHAF4Q5VUM1 108 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 TRIM68Q6AZZ1 485 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 CXorf38Q8TB03 319 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 USP13Q92995 863 aaPredicted RBP18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 HVCN1Q96D96 273 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 SAAL1Q96ER3 474 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 GCNAQ96QF7 691 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 FAM213AQ9BRX8 229 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 RTKNQ9BST9 563 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 FGFBP2Q9BYJ0 223 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 TCHHQ07283 1943 aa18.11■□□□□ 0.49
HDGFL3-203ENST00000563404 EXTL3O43909 919 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 IL18RAPO95256 599 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 CCDC142Q17RM4 750 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 L1TD1Q5T7N2 865 aaKnown RBP18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 TXNDC8Q6A555 127 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 DCP1BQ8IZD4 617 aaKnown RBP18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 PDCL2Q8N4E4 241 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 MAB21L3Q8N8X9 362 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 C1orf127Q8N9H9 656 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 PI4K2AQ9BTU6 479 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 MRPL44Q9H9J2 332 aaKnown RBP18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 SEMA4GQ9NTN9 838 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 STK17AQ9UEE5 414 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 L1RE1Q9UN81 338 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 PCDHB5Q9Y5E4 795 aa18.1■□□□□ 0.49
HDGFL3-203ENST00000563404 VPS37CA5D8V6 355 aaPredicted RBP18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 HCRTO43612 131 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms