RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 TMC2Q8TDI7 906 aa30.35■■■□□ 2.45
NME3-203ENST00000563367 PKMYT1Q99640 499 aa30.35■■■□□ 2.45
NME3-203ENST00000563367 XYLT2Q9H1B5 865 aa30.35■■■□□ 2.45
NME3-203ENST00000563367 MAPK13O15264 365 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 PHACTR2O75167 634 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 ALDH1A3P47895 512 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 LHX1P48742 406 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 AP3M2P53677 418 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 EPHB3P54753 998 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 MYL7Q01449 175 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 TSPY1Q01534 308 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 PLD1Q13393 1074 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 ADAM9Q13443 819 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 TRPC3Q13507 836 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 COBLL1Q53SF7 1204 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 SLC44A3Q8N4M1 653 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 C2orf15Q8WU43 125 aaKnown RBP30.34■■■□□ 2.45
NME3-203ENST00000563367 MMS19Q96T76 1030 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 SEPT5Q99719 369 aaPredicted RBP30.34■■■□□ 2.45
NME3-203ENST00000563367 LRRC3Q9BY71 257 aa30.34■■■□□ 2.45
NME3-203ENST00000563367 ABI2Q9NYB9 513 aaPredicted RBP30.34■■■□□ 2.45
NME3-203ENST00000563367 NARSO43776 548 aaKnown RBP30.33■■■□□ 2.45
NME3-203ENST00000563367 MOSPD3O75425 235 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 VNN1O95497 513 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 LMO2P25791 158 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 RPL13P26373 211 aaKnown RBP30.33■■■□□ 2.45
NME3-203ENST00000563367 EPHA5P54756 1037 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 SMARCB1Q12824 385 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 BIRC3Q13489 604 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 CCDC142Q17RM4 750 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 MGAT5BQ3V5L5 792 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 INTS6LQ5JSJ4 861 aaKnown RBP30.33■■■□□ 2.45
NME3-203ENST00000563367 ISM2Q6H9L7 571 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 PARM1Q6UWI2 310 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 PDZD4Q76G19 769 aaPredicted RBP30.33■■■□□ 2.45
NME3-203ENST00000563367 FGF14Q92915 247 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 ELMO3Q96BJ8 720 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 MCRS1Q96EZ8 462 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 RPP25Q9BUL9 199 aaKnown RBP30.33■■■□□ 2.45
NME3-203ENST00000563367 MAN1B1Q9UKM7 699 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 NUMBLQ9Y6R0 609 aa30.33■■■□□ 2.45
NME3-203ENST00000563367 PTPRDP23468 1912 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 STAU1O95793 577 aaKnown RBP30.32■■■□□ 2.44
NME3-203ENST00000563367 HAPLN1P10915 354 aaPredicted RBP30.32■■■□□ 2.44
NME3-203ENST00000563367 MYL4P12829 197 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 TUFMP49411 452 aaKnown RBP30.32■■■□□ 2.44
NME3-203ENST00000563367 EDRF1Q3B7T1 1238 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 WDR72Q3MJ13 1102 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 CYP4A22Q5TCH4 519 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 SPPL2BQ8TCT7 592 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 NXPE3Q969Y0 559 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 EEF2KMTQ96G04 330 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 MRPL45Q9BRJ2 306 aaKnown RBP30.32■■■□□ 2.44
NME3-203ENST00000563367 ASAH2Q9NR71 780 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 RAPGEFL1Q9UHV5 662 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 GTF3C4Q9UKN8 822 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 NME7Q9Y5B8 376 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 PCDHB5Q9Y5E4 795 aa30.32■■■□□ 2.44
NME3-203ENST00000563367 ZNF197O14709 1029 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 ATP2C2O75185 946 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 ATF6P18850 670 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 COL9A1P20849 921 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 WARSP23381 471 aaKnown RBP30.31■■■□□ 2.44
NME3-203ENST00000563367 ATICP31939 592 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 VAMP7P51809 220 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 NCOA4Q13772 614 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 ZACNQ401N2 412 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 BMP8AQ7Z5Y6 402 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 DNAJB7Q7Z6W7 309 aaPredicted RBP30.31■■■□□ 2.44
NME3-203ENST00000563367 TMC8Q8IU68 726 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 FAM186BQ8IYM0 893 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 SYAP1Q96A49 352 aaPredicted RBP30.31■■■□□ 2.44
NME3-203ENST00000563367 LPIN3Q9BQK8 851 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 NXF1Q9UBU9 619 aaKnown RBP30.31■■■□□ 2.44
NME3-203ENST00000563367 DUSP12Q9UNI6 340 aa30.31■■■□□ 2.44
NME3-203ENST00000563367 DENND4CQ5VZ89 1909 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 MYBPHLA2RUH7 354 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 IKBKBO14920 756 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 GJA1P17302 382 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 PCSK1P29120 753 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 PSMC2P35998 433 aaKnown RBP30.3■■■□□ 2.44
NME3-203ENST00000563367 PMS1P54277 932 aaKnown RBP30.3■■■□□ 2.44
NME3-203ENST00000563367 UBE2HP62256 183 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 TNNC1P63316 161 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 SV2AQ7L0J3 742 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 ADSSL1Q8N142 457 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 PSMG2Q969U7 264 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 PBXIP1Q96AQ6 731 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 PI4K2AQ9BTU6 479 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 ZNF334Q9HCZ1 680 aaPredicted RBP30.3■■■□□ 2.44
NME3-203ENST00000563367 GDE1Q9NZC3 331 aa30.3■■■□□ 2.44
NME3-203ENST00000563367 ZNF318Q5VUA4 2279 aa30.29■■■□□ 2.44
NME3-203ENST00000563367 MICAL2O94851 1124 aa30.29■■■□□ 2.44
NME3-203ENST00000563367 PDGFRBP09619 1106 aa30.29■■■□□ 2.44
NME3-203ENST00000563367 TRIM49P0CI25 452 aa30.29■■■□□ 2.44
NME3-203ENST00000563367 TRIM49CP0CI26 452 aa30.29■■■□□ 2.44
NME3-203ENST00000563367 NFE2Q16621 373 aaPredicted RBP30.29■■■□□ 2.44
NME3-203ENST00000563367 ANKRD40Q6AI12 368 aa30.29■■■□□ 2.44
NME3-203ENST00000563367 FAM171BQ6P995 826 aa30.29■■■□□ 2.44
NME3-203ENST00000563367 INTS8Q75QN2 995 aaKnown RBP30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms