RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 A0A0C4DFX4 3053 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 ARHGEF37A1IGU5 675 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 WDR27A2RRH5 827 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 H7C4K7 107 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 CYB561D2O14569 222 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 SLC16A3O15427 465 aaKnown RBP6.65□□□□□ -1.34
CNOT1-204ENST00000563130 MBD3O95983 291 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 KRT19P08727 400 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 ODC1P11926 461 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 VAMP7P51809 220 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 ITIH3Q06033 890 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 PPP3CAQ08209 521 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 SMAD4Q13485 552 aaKnown RBP6.65□□□□□ -1.34
CNOT1-204ENST00000563130 OVOS1Q6IE37 1185 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 EP400NLQ6ZTU2 488 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 SV2AQ7L0J3 742 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 DPH6Q7L8W6 267 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 USP37Q86T82 979 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 PALB2Q86YC2 1186 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 GLYCTKQ8IVS8 523 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 TOP6BLQ8N6T0 577 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 CMASQ8NFW8 434 aaPredicted RBP6.65□□□□□ -1.34
CNOT1-204ENST00000563130 FEZF2Q8TBJ5 459 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 SPATA18Q8TC71 538 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 NELFBQ8WX92 580 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 TSG101Q99816 390 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 RTP3Q9BQQ7 232 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 PRKD2Q9BZL6 878 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 ADAM7Q9H2U9 754 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 MAN1C1Q9NR34 630 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 DPP7Q9UHL4 492 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 DSEQ9UL01 958 aa6.65□□□□□ -1.34
CNOT1-204ENST00000563130 TSC2P49815 1807 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 BICDL2A1A5D9 508 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 OR6C75A6NL08 312 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 CFAP99D6REC4 459 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 GABRDO14764 452 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 VNN1O95497 513 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 IL9P15248 144 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 ATF2P15336 505 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 MYO1EQ12965 1108 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 PAK1Q13153 545 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 GPR17Q13304 367 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 SOWAHAQ2M3V2 549 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 CTXN3Q4LDR2 81 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 WSCD1Q658N2 575 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 TPGS2Q68CL5 300 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 PTCRAQ6ISU1 281 aaPredicted RBP6.65□□□□□ -1.35
CNOT1-204ENST00000563130 KLHL10Q6JEL2 608 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 RTL10Q7L3V2 364 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 FILIP1Q7Z7B0 1213 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 TMEM86AQ8N2M4 240 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 MLKLQ8NB16 471 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 KREMEN2Q8NCW0 462 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 OR10T2Q8NGX3 314 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 HPDLQ96IR7 371 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 CEP63Q96MT8 703 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 SFXN1Q9H9B4 322 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 L1RE1Q9UN81 338 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 USP15Q9Y4E8 981 aaPredicted RBP6.65□□□□□ -1.35
CNOT1-204ENST00000563130 SNX9Q9Y5X1 595 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 PLXNA3P51805 1871 aa6.65□□□□□ -1.35
CNOT1-204ENST00000563130 VNN2O95498 520 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 FAM163BP0C2L3 166 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 SPATA31D3P0C874 917 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 TRIM49P0CI25 452 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 TRIM49CP0CI26 452 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 EPB41P11171 864 aaKnown RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 KRT13P13646 458 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 HOXA9P31269 272 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 ATICP31939 592 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 GTF2H1P32780 548 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 SLC19A1P41440 591 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 MARSP56192 900 aaKnown RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 MYL6P60660 151 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 NCOA4Q13772 614 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 CLUL1Q15846 466 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 UVSSAQ2YD98 709 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 DPCR1Q3MIW9 517 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 CYP26C1Q6V0L0 522 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 SPATA31D4Q6ZUB0 917 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 GPR149Q86SP6 731 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 TCEAL8Q8IYN2 117 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 PDCL2Q8N4E4 241 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 C12orf76Q8N812 135 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 KBTBD7Q8WVZ9 684 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 SLC35C1Q96A29 364 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 ZNF707Q96C28 371 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 ZDHHC7Q9NXF8 308 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 AFF4Q9UHB7 1163 aaKnown RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 RWDD2AQ9UIY3 292 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 MAFFQ9ULX9 164 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 CTNND2Q9UQB3 1225 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 MTCL1Q9Y4B5 1905 aaKnown RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 HUS1O60921 280 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 RFPL2O75678 378 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 ASS1P00966 412 aaKnown RBP6.64□□□□□ -1.35
CNOT1-204ENST00000563130 POU2F2P09086 479 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 GCLMP48507 274 aa6.64□□□□□ -1.35
CNOT1-204ENST00000563130 STX17P56962 302 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms