RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SSH3Q8TE77 659 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 TTC17Q96AE7 1141 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 TMEM125Q96AQ2 219 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 VKORC1Q9BQB6 163 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 ANLNQ9NQW6 1124 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 ETAA1Q9NY74 926 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 ING1Q9UK53 422 aaPredicted RBP3.69□□□□□ -1.82
CHD9-207ENST00000562806 PCDHA6Q9UN73 950 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 L1RE1Q9UN81 338 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 SHOC2Q9UQ13 582 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 TMX2Q9Y320 296 aa3.69□□□□□ -1.82
CHD9-207ENST00000562806 EPN1Q9Y6I3 576 aaPredicted RBP3.69□□□□□ -1.82
CHD9-207ENST00000562806 CCDC78A2IDD5 438 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 FOXN3O00409 490 aaPredicted RBP3.68□□□□□ -1.82
CHD9-207ENST00000562806 KIF3BO15066 747 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 YY2O15391 372 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 TBC1D4O60343 1298 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 MGEA5O60502 916 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 ZBED1O96006 694 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 LMNAP02545 664 aaKnown RBP3.68□□□□□ -1.82
CHD9-207ENST00000562806 AHSGP02765 367 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 KRT4P19013 534 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 CD6P30203 668 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 LRPAP1P30533 357 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 GCLCP48506 637 aaPredicted RBP3.68□□□□□ -1.82
CHD9-207ENST00000562806 SOX10P56693 466 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 INHBEP58166 350 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 LOXL3P58215 753 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 EXOSC9Q06265 439 aaKnown RBP3.68□□□□□ -1.82
CHD9-207ENST00000562806 FSTL1Q12841 308 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 RAB32Q13637 225 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 CD300EQ496F6 205 aaPredicted RBP3.68□□□□□ -1.82
CHD9-207ENST00000562806 CRB2Q5IJ48 1285 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 PLAC9Q5JTB6 97 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 STRIP1Q5VSL9 837 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 KIAA0895LQ68EN5 471 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 DARS2Q6PI48 645 aaKnown RBP3.68□□□□□ -1.82
CHD9-207ENST00000562806 CHST15Q7LFX5 561 aaPredicted RBP3.68□□□□□ -1.82
CHD9-207ENST00000562806 OVCH2Q7RTZ1 564 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 GRASPQ7Z6J2 395 aaPredicted RBP3.68□□□□□ -1.82
CHD9-207ENST00000562806 BEND2Q8NDZ0 799 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 MRGPRX1Q96LB2 322 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 LRFN3Q9BTN0 628 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 SPATA5L1Q9BVQ7 753 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 B3GNT5Q9BYG0 378 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 LRRC27Q9C0I9 530 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 IKZF4Q9H2S9 585 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 ARMT1Q9H993 441 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 KLC4Q9NSK0 619 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 HESX1Q9UBX0 185 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 CPA4Q9UI42 421 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 TPCN1Q9ULQ1 816 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 INSL6Q9Y581 213 aa3.68□□□□□ -1.82
CHD9-207ENST00000562806 GCOM1H8Y6P7 765 aaPredicted RBP3.67□□□□□ -1.82
CHD9-207ENST00000562806 GOLIM4O00461 696 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 TLR5O60602 858 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 PPFIA2O75334 1257 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 NXPH3O95157 252 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 KIF20AO95235 890 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 GRPP07492 148 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 ATF3P18847 181 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 HDCP19113 662 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 EN2P19622 333 aaPredicted RBP3.67□□□□□ -1.82
CHD9-207ENST00000562806 GATA3P23771 443 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 PPIFP30405 207 aaKnown RBP3.67□□□□□ -1.82
CHD9-207ENST00000562806 CXCR5P32302 372 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 MPLP40238 635 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 PHKA1P46020 1223 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 PXNP49023 591 aaPredicted RBP3.67□□□□□ -1.82
CHD9-207ENST00000562806 ARFIP2P53365 341 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 LRRC41Q15345 812 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 SF3B3Q15393 1217 aaKnown RBP3.67□□□□□ -1.82
CHD9-207ENST00000562806 SMN1Q16637 294 aaKnown RBP3.67□□□□□ -1.82
CHD9-207ENST00000562806 ICE2Q659A1 982 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 TAF2Q6P1X5 1199 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 SLC30A10Q6XR72 485 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 FMNL3Q8IVF7 1028 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 RAVER1Q8IY67 606 aaKnown RBP3.67□□□□□ -1.82
CHD9-207ENST00000562806 SLC44A3Q8N4M1 653 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 FAM46DQ8NEK8 389 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 PLBD2Q8NHP8 589 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 TTC8Q8TAM2 541 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 PPP1R35Q8TAP8 253 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 ACTRT2Q8TDY3 377 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 ATRIPQ8WXE1 791 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 FBXL20Q96IG2 436 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 C8orf48Q96LL4 319 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 PTDSS2Q9BVG9 487 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 TRIM54Q9BYV2 358 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 DPH1Q9BZG8 443 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 KLHL42Q9P2K6 505 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 SLC17A6Q9P2U8 582 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 XPR1Q9UBH6 696 aa3.67□□□□□ -1.82
CHD9-207ENST00000562806 RGS17Q9UGC6 210 aaPredicted RBP3.67□□□□□ -1.82
CHD9-207ENST00000562806 CFAP69A5D8W1 941 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 VSTM5A8MXK1 200 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 DNAJB5O75953 348 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 ZFPL1O95159 310 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 UNC5CO95185 931 aa3.66□□□□□ -1.82
CHD9-207ENST00000562806 ONECUT2O95948 504 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms