RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 TBCCQ15814 346 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 ZNF260Q3ZCT1 412 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 SLC30A10Q6XR72 485 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 GADL1Q6ZQY3 521 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 CNTD1Q8N815 330 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 FANCBQ8NB91 859 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 POC1BQ8TC44 478 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 ATRIPQ8WXE1 791 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 TBC1D5Q92609 795 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 REPS1Q96D71 796 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 HMCESQ96FZ2 354 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 VKORC1Q9BQB6 163 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 PUS7LQ9H0K6 701 aaKnown RBP4.12□□□□□ -1.75
DENND4A-205ENST00000562540 ARHGEF3Q9NR81 526 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 ZNF277Q9NRM2 450 aaPredicted RBP4.12□□□□□ -1.75
DENND4A-205ENST00000562540 HOMER2Q9NSB8 354 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 ZNF580Q9UK33 172 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 PCDHA13Q9Y5I0 950 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.12□□□□□ -1.75
DENND4A-205ENST00000562540 PHLDB1Q86UU1 1377 aa4.12□□□□□ -1.75
DENND4A-205ENST00000562540 KCNU1A8MYU2 1149 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 INSIG1O15503 277 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 FAM163BP0C2L3 166 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 SNHG28P0DPA3 235 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 JUPP14923 745 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 EVA1CP58658 441 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 RAPGEF1Q13905 1077 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 RAB39AQ14964 217 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 TEDDM1Q5T9Z0 273 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 ZNF804AQ7Z570 1209 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 CNGA4Q8IV77 575 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 AMOTL1Q8IY63 956 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 SSH1Q8WYL5 1049 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 HDAC10Q969S8 669 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 AMBRA1Q9C0C7 1298 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 VPS16Q9H269 839 aa4.11□□□□□ -1.75
DENND4A-205ENST00000562540 TUBA8Q9NY65 449 aaPredicted RBP4.11□□□□□ -1.75
DENND4A-205ENST00000562540 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.11□□□□□ -1.75
DENND4A-205ENST00000562540 PRRT4C9JH25 899 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 H3BNC9 293 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 SGTAO43765 313 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 KATNA1O75449 491 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 SFPQP23246 707 aaKnown RBP eCLIP4.1□□□□□ -1.75
DENND4A-205ENST00000562540 ARHGAP25P42331 645 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 ERVK-21P61565 698 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 ITKQ08881 620 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 MTMR1Q13613 665 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 LAMB3Q13751 1172 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 RBM20Q5T481 1227 aaKnown RBP4.1□□□□□ -1.75
DENND4A-205ENST00000562540 PXDC1Q5TGL8 231 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 KLHDC4Q8TBB5 520 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 FAM136AQ96C01 138 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 SMAD5Q99717 465 aaKnown RBP4.1□□□□□ -1.75
DENND4A-205ENST00000562540 PRSS22Q9GZN4 317 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 SMOC2Q9H3U7 446 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 TRHDEQ9UKU6 1024 aa4.1□□□□□ -1.75
DENND4A-205ENST00000562540 SMIM35A0A1B0GVV1 85 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 K7ESF4 209 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 QSOX1O00391 747 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 ZNF213O14771 459 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 SOAT2O75908 522 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 DNAJB5O75953 348 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 ITGALP20701 1170 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 LPOP22079 712 aaPredicted RBP4.09□□□□□ -1.75
DENND4A-205ENST00000562540 CD6P30203 668 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 NR4A2P43354 598 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 ALDH9A1P49189 494 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 TLE1Q04724 770 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 KLF1Q13351 362 aaPredicted RBP4.09□□□□□ -1.75
DENND4A-205ENST00000562540 RABEP1Q15276 862 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 CLUL1Q15846 466 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 AARS2Q5JTZ9 985 aaKnown RBP4.09□□□□□ -1.75
DENND4A-205ENST00000562540 ZNF618Q5T7W0 954 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 SYDE2Q5VT97 1194 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 ANKRD16Q6P6B7 361 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 PSD4Q8NDX1 1056 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 SCAMP4Q969E2 229 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 ETAA1Q9NY74 926 aa4.09□□□□□ -1.75
DENND4A-205ENST00000562540 ZNF785A8K8V0 405 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 H0YIZ8 118 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 MYO1FO00160 1098 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 MT-CO1P00395 513 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 CHRM3P20309 590 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 IARSP41252 1262 aaKnown RBP4.08□□□□□ -1.76
DENND4A-205ENST00000562540 SLC16A1P53985 500 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 PSMC1P62191 440 aaKnown RBP4.08□□□□□ -1.76
DENND4A-205ENST00000562540 ABCB5Q2M3G0 1257 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 CCDC93Q567U6 631 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 TAF2Q6P1X5 1199 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 CATSPERGQ6ZRH7 1159 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 KRT73Q86Y46 540 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 ANKRD13AQ8IZ07 590 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 SAMD14Q8IZD0 417 aaPredicted RBP4.08□□□□□ -1.76
DENND4A-205ENST00000562540 CLPTM1LQ96KA5 538 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 MRGPRX4Q96LA9 322 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 CALCOCO1Q9P1Z2 691 aa4.08□□□□□ -1.76
DENND4A-205ENST00000562540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.08□□□□□ -1.76
DENND4A-205ENST00000562540 MYMKA6NI61 221 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 NDUFS2O75306 463 aa4.07□□□□□ -1.76
DENND4A-205ENST00000562540 CHEK2O96017 543 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms