RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 STX2P32856 288 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 RPL7AP62424 266 aaKnown RBP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 TAF11Q15544 211 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 STXBP2Q15833 593 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 CWF19L1Q69YN2 538 aaKnown RBP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 PPP1R2P3Q6NXS1 205 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 CYP4X1Q8N118 509 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 ZNF606Q8WXB4 792 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 RBM15Q96T37 977 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 TCHPQ9BT92 498 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 DHX33Q9H6R0 707 aaKnown RBP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 DOCK5Q9H7D0 1870 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 NKIRAS1Q9NYS0 192 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 PIM2Q9P1W9 311 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 ZNF148Q9UQR1 794 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 ARID2Q68CP9 1835 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 A0A0B4J269 797 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 UBOX5O94941 541 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 GH1P01241 217 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 GMPSP49915 693 aaPredicted RBP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 ZNF268Q14587 947 aaPredicted RBP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 SLC5A9Q2M3M2 681 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 RBM41Q96IZ5 413 aaKnown RBP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 NAALADL1Q9UQQ1 740 aa11.58□□□□□ -0.56
NEIL1-202ENST00000561643 MAFBQ9Y5Q3 323 aaPredicted RBP11.58□□□□□ -0.56
NEIL1-202ENST00000561643 A6NHS1 94 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 HGSO14964 777 aaPredicted RBP11.57□□□□□ -0.56
NEIL1-202ENST00000561643 SUN1O94901 812 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 RTN3O95197 1032 aaPredicted RBP11.57□□□□□ -0.56
NEIL1-202ENST00000561643 PIGRP01833 764 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 GSTA1P08263 222 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 ARL2P36404 184 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 MAGEA4P43358 317 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 SCNN1BP51168 640 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 LMNB2Q03252 620 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 STAT4Q14765 748 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 DCUN1D2Q6PH85 259 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 WDR81Q562E7 1941 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 RGPD3A6NKT7 1758 aaPredicted RBP11.57□□□□□ -0.56
NEIL1-202ENST00000561643 RGPD4Q7Z3J3 1758 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 CFAP73A6NFT4 308 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 SPDYE5A6NIY4 337 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 TCEA3O75764 348 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 EDN1P05305 212 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 CETPP11597 493 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 TCF4P15884 667 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 RPS12P25398 132 aaKnown RBP11.57□□□□□ -0.56
NEIL1-202ENST00000561643 MPP2Q14168 576 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 TMED2Q15363 201 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 ZNF394Q53GI3 561 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 DNAJC24Q6P3W2 148 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 ARHGEF18Q6ZSZ5 1173 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 ZBTB33Q86T24 672 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 RCOR2Q8IZ40 523 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 CCDC97Q96F63 343 aaPredicted RBP11.57□□□□□ -0.56
NEIL1-202ENST00000561643 MCEEQ96PE7 176 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 SAYSD1Q9NPB0 183 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 DNPEPQ9ULA0 475 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 CNTNAP2Q9UHC6 1331 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 TNS1Q9HBL0 1735 aaKnown RBP11.57□□□□□ -0.56
NEIL1-202ENST00000561643 TJP3O95049 919 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 KRT16P08779 473 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 MMP8P22894 467 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 KLRC2P26717 231 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 TUBP50607 506 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 LAMB3Q13751 1172 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 PDCD2Q16342 344 aaPredicted RBP11.57□□□□□ -0.56
NEIL1-202ENST00000561643 SCARA3Q6AZY7 606 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 MFSD7Q6UXD7 560 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 CEP128Q6ZU80 1094 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 ANKRD35Q8N283 1001 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 CKAP2Q8WWK9 683 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 FAM210AQ96ND0 272 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 TGS1Q96RS0 853 aaKnown RBP11.57□□□□□ -0.56
NEIL1-202ENST00000561643 FHDC1Q9C0D6 1143 aaPredicted RBP11.57□□□□□ -0.56
NEIL1-202ENST00000561643 ECT2Q9H8V3 914 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 LGALS13Q9UHV8 139 aa11.57□□□□□ -0.56
NEIL1-202ENST00000561643 MYH9P35579 1960 aaKnown RBP11.56□□□□□ -0.56
NEIL1-202ENST00000561643 RASA4BC9J798 803 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 RASA4O43374 803 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 LIASO43766 372 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 CALB1P05937 261 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 PDHA1P08559 390 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 CCND1P24385 295 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 NCALDP61601 193 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 MXRA7P84157 204 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 HHATQ5VTY9 493 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 CATSPERGQ6ZRH7 1159 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 ZCCHC9Q8N567 271 aaKnown RBP11.56□□□□□ -0.56
NEIL1-202ENST00000561643 HAUS1Q96CS2 278 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 C12orf42Q96LP6 360 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 CFAP57Q96MR6 1250 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 SLITRK1Q96PX8 696 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 TSPYL2Q9H2G4 693 aaPredicted RBP11.56□□□□□ -0.56
NEIL1-202ENST00000561643 CNTN6Q9UQ52 1028 aa11.56□□□□□ -0.56
NEIL1-202ENST00000561643 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.56□□□□□ -0.56
NEIL1-202ENST00000561643 EXOC1LA0A1B0GW35 172 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms