RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 DNAJC12Q9UKB3 198 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 GTF3C4Q9UKN8 822 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 SSX2IPQ9Y2D8 614 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 USP20Q9Y2K6 914 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 PCDHA3Q9Y5H8 950 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ALG6Q9Y672 507 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 EVPLQ92817 2033 aa9.05□□□□□ -0.96
CCDC33-209ENST00000560565 ALPK3Q96L96 1907 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 SOWAHBA6NEL2 793 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 KBTBD13C9JR72 458 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 GCNT3O95395 438 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 ARP10275 920 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 TGFB3P10600 412 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 COL6A1P12109 1028 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 TSHRP16473 764 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 ATP4AP20648 1035 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 EDNRBP24530 442 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 MARK3P27448 753 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 PTPN4P29074 926 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 PHBP35232 272 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 FLT3P36888 993 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 IRX4P78413 519 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 PTP4A2Q12974 167 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 GIT2Q14161 759 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 DRAP1Q14919 205 aaPredicted RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 TBCCQ15814 346 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 STXBP2Q15833 593 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 GJC2Q5T442 439 aaPredicted RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 DAB2IPQ5VWQ8 1189 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 NAIF1Q69YI7 327 aaPredicted RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 ZNF746Q6NUN9 644 aaPredicted RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 ZNF365Q70YC5 407 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 Q7L0L9 218 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 PHLDB2Q86SQ0 1253 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 EXOC3L1Q86VI1 746 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 TRIM42Q8IWZ5 723 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 GALNT15Q8N3T1 639 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 ATL2Q8NHH9 583 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 IL31RAQ8NI17 732 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 MIPOL1Q8TD10 442 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 LRRC8CQ8TDW0 803 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 DNAJC9Q8WXX5 260 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 APBB2Q92870 758 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 FGD4Q96M96 766 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 OLFM3Q96PB7 478 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 NR1H4Q96RI1 486 aaPredicted RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 SMC6Q96SB8 1091 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 HSD17B14Q9BPX1 270 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 SENP7Q9BQF6 1050 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 EIF2AK1Q9BQI3 630 aaKnown RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 CELF4Q9BZC1 486 aaKnown RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 SENP6Q9GZR1 1112 aaPredicted RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 INTS2Q9H0H0 1204 aaKnown RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 XPNPEP3Q9NQH7 507 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 ABCF3Q9NUQ8 709 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 SEPT11Q9NVA2 429 aaKnown RBP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCDC33-209ENST00000560565 NDUFA13Q9P0J0 144 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 DNAJB4Q9UDY4 337 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 ASIC3Q9UHC3 531 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 SLC24A2Q9UI40 661 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 ANGPTL2Q9UKU9 493 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 STK38LQ9Y2H1 464 aa9.04□□□□□ -0.96
CCDC33-209ENST00000560565 BAHCC1Q9P281 2608 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 MAGEA13PA6NCF6 341 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 WDR64B1ANS9 1081 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 DHX15O43143 795 aaKnown RBP9.03□□□□□ -0.96
CCDC33-209ENST00000560565 AKAP3O75969 853 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 LYPLA2O95372 231 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 SHBGP04278 402 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 P4HBP07237 508 aaKnown RBP9.03□□□□□ -0.96
CCDC33-209ENST00000560565 MYCLP12524 364 aaPredicted RBP9.03□□□□□ -0.96
CCDC33-209ENST00000560565 RPL21P46778 160 aaKnown RBP9.03□□□□□ -0.96
CCDC33-209ENST00000560565 IFNAR2P48551 515 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 MFAP3P55082 362 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 BPIFB4P59827 614 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 RPL26P61254 145 aaKnown RBP9.03□□□□□ -0.96
CCDC33-209ENST00000560565 OCRLQ01968 901 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 TRADDQ15628 312 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 SGO2Q562F6 1265 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 CWF19L1Q69YN2 538 aaKnown RBP9.03□□□□□ -0.96
CCDC33-209ENST00000560565 CCDC62Q6P9F0 684 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 PCGF5Q86SE9 256 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 RNF180Q86T96 592 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 CATSPER3Q86XQ3 398 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 ZNF677Q86XU0 584 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 EGFL6Q8IUX8 553 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 GLYCTKQ8IVS8 523 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 PRELID2Q8N945 189 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 ZNF570Q96NI8 536 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 NACC1Q96RE7 527 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 FRMD8P1Q9BZ68 369 aaPredicted RBP9.03□□□□□ -0.96
CCDC33-209ENST00000560565 TRIM4Q9C037 500 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 EPB41L4BQ9H329 900 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 SEMA4AQ9H3S1 761 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 SIX2Q9NPC8 291 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 MTMR10Q9NXD2 777 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 ADAM22Q9P0K1 906 aa9.03□□□□□ -0.96
CCDC33-209ENST00000560565 ANAPC5Q9UJX4 755 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms