RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ZNF197O14709 1029 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 EXOC3O60645 756 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 TNNC2P02585 160 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 CLDN10P78369 228 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 NFIL3Q16649 462 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 PRSS36Q5K4E3 855 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 LMBRD2Q68DH5 695 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 CENPPQ6IPU0 288 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 ASCL5Q7RTU5 278 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 TRAPPC11Q7Z392 1133 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 FANCMQ8IYD8 2048 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 TMEM86AQ8N2M4 240 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 ELMOD1Q8N336 334 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 GUF1Q8N442 669 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 LEMD2Q8NC56 503 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 PATJQ8NI35 1801 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 NKD2Q969F2 451 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 FNBP1Q96RU3 617 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 TMEM209Q96SK2 561 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 ZCWPW1Q9H0M4 648 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 CRISPLD1Q9H336 500 aa16.32■□□□□ 0.2
SNRPA1-210ENST00000560383 MTMR11A4FU01 709 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 KRT19P08727 400 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 DLATP10515 647 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 CEBPBP17676 345 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 SMARCB1Q12824 385 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 MYO1EQ12965 1108 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 MLF2Q15773 248 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 PDZD4Q76G19 769 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 DPH6Q7L8W6 267 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 FRMD5Q7Z6J6 570 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 ELOA2Q8IYF1 753 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 THEM5Q8N1Q8 247 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 PDCL2Q8N4E4 241 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 TOP6BLQ8N6T0 577 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 ING5Q8WYH8 240 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 ELSPBP1Q96BH3 223 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 CCDC127Q96BQ5 260 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 KXD1Q9BQD3 176 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 OSBPL6Q9BZF3 934 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 SEMA4AQ9H3S1 761 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 L1RE1Q9UN81 338 aa16.31■□□□□ 0.2
SNRPA1-210ENST00000560383 FAM186AA6NE01 2351 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 KANSL1LA0AUZ9 987 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 GABRDO14764 452 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 HUS1O60921 280 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 NR3C1P04150 777 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 TNNI1P19237 187 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 MAGEA9P43362 315 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 EPHA5P54756 1037 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 TWF1Q12792 350 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 DUSP4Q13115 394 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 PLD1Q13393 1074 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 PNOCQ13519 176 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 IQCEQ6IPM2 695 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 LRRTM3Q86VH5 581 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 ATAD1Q8NBU5 361 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 ST13P5Q8NFI4 369 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 PLEKHO2Q8TD55 490 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 PARD3BQ8TEW8 1205 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 C2orf15Q8WU43 125 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 ZNF516Q92618 1163 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 PGLYRP2Q96PD5 576 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 GSDMAQ96QA5 445 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 CORO1BQ9BR76 489 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 CEP72Q9P209 647 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 YIPF1Q9Y548 306 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 SNX9Q9Y5X1 595 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 RIF1Q5UIP0 2472 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 COL4A2P08572 1712 aa16.3■□□□□ 0.2
SNRPA1-210ENST00000560383 MAPK13O15264 365 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 STAU1O95793 577 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 DCNP07585 359 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 FCARP24071 287 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 AP3M2P53677 418 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 BFSP1Q12934 665 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 SOWAHAQ2M3V2 549 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 SLC39A12Q504Y0 691 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 ZCWPW2Q504Y3 356 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 SLC44A4Q53GD3 710 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 COBLL1Q53SF7 1204 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 CYP4A22Q5TCH4 519 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 DNASE1L2Q92874 299 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 MCRS1Q96EZ8 462 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 ZNF512Q96ME7 567 aaPredicted RBP16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 ACBD6Q9BR61 282 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 DNAJC25Q9H1X3 360 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 R3HCC1Q9Y3T6 440 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 ZNF292O60281 2723 aa16.29■□□□□ 0.2
SNRPA1-210ENST00000560383 DCHS1Q96JQ0 3298 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 TULP1O00294 542 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 CALUO43852 315 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 CST3P01034 146 aaPredicted RBP16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 FAM163BP0C2L3 166 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 CCR2P41597 374 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 LHX1P48742 406 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 CASP4P49662 377 aa16.28■□□□□ 0.2
SNRPA1-210ENST00000560383 MCCD1P59942 119 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms