RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 TAF12Q16514 161 aa18.78■□□□□ 0.6
CRTC3-208ENST00000560098 SV2CQ496J9 727 aa18.78■□□□□ 0.6
CRTC3-208ENST00000560098 DGKKQ5KSL6 1271 aa18.78■□□□□ 0.6
CRTC3-208ENST00000560098 NT5DC4Q86YG4 428 aa18.78■□□□□ 0.6
CRTC3-208ENST00000560098 BPIFB1Q8TDL5 484 aa18.78■□□□□ 0.6
CRTC3-208ENST00000560098 GIPC2Q8TF65 315 aa18.78■□□□□ 0.6
CRTC3-208ENST00000560098 STRA6Q9BX79 667 aa18.78■□□□□ 0.6
CRTC3-208ENST00000560098 MRPL44Q9H9J2 332 aaKnown RBP18.78■□□□□ 0.6
CRTC3-208ENST00000560098 SEL1LQ9UBV2 794 aa18.78■□□□□ 0.6
CRTC3-208ENST00000560098 CLIC4Q9Y696 253 aa18.78■□□□□ 0.6
CRTC3-208ENST00000560098 PRR5-ARHGAP8B1AHC4 643 aa18.77■□□□□ 0.6
CRTC3-208ENST00000560098 HAPLN1P10915 354 aaPredicted RBP18.77■□□□□ 0.6
CRTC3-208ENST00000560098 TGM1P22735 817 aa18.77■□□□□ 0.6
CRTC3-208ENST00000560098 ARHGAP8P85298 464 aa18.77■□□□□ 0.6
CRTC3-208ENST00000560098 PLCB2Q00722 1185 aa18.77■□□□□ 0.6
CRTC3-208ENST00000560098 PTPAQ15257 358 aa18.77■□□□□ 0.6
CRTC3-208ENST00000560098 WDR44Q5JSH3 913 aa18.77■□□□□ 0.6
CRTC3-208ENST00000560098 DCP1BQ8IZD4 617 aaKnown RBP18.77■□□□□ 0.6
CRTC3-208ENST00000560098 ZNF560Q96MR9 790 aa18.77■□□□□ 0.6
CRTC3-208ENST00000560098 ABI2Q9NYB9 513 aaPredicted RBP18.77■□□□□ 0.6
CRTC3-208ENST00000560098 FBXO2Q9UK22 296 aaPredicted RBP18.77■□□□□ 0.6
CRTC3-208ENST00000560098 USP18Q9UMW8 372 aa18.77■□□□□ 0.6
CRTC3-208ENST00000560098 PAPSS2O95340 614 aaPredicted RBP18.76■□□□□ 0.59
CRTC3-208ENST00000560098 GAP43P17677 238 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 TNK2Q07912 1038 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 KCNA1Q09470 495 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 LPAL2Q16609 132 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 RRAGBQ5VZM2 374 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 LAIR1Q6GTX8 287 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 Q6ZS52 159 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 SV2BQ7L1I2 683 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 FAM213AQ9BRX8 229 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 SLC46A2Q9BY10 475 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 PARD6AQ9NPB6 346 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 THG1LQ9NWX6 298 aaKnown RBP18.76■□□□□ 0.59
CRTC3-208ENST00000560098 ZMYM5Q9UJ78 669 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 EXOC7Q9UPT5 735 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 SRPRBQ9Y5M8 271 aaKnown RBP18.76■□□□□ 0.59
CRTC3-208ENST00000560098 ANK1P16157 1881 aa18.76■□□□□ 0.59
CRTC3-208ENST00000560098 SCN1AP35498 2009 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 MYMKA6NI61 221 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 PDCP20941 246 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 TXLNAP40222 546 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 PNPLA4P41247 253 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 DMWDQ09019 674 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 CUL4AQ13619 759 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 PON2Q15165 354 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 L1TD1Q5T7N2 865 aaKnown RBP18.75■□□□□ 0.59
CRTC3-208ENST00000560098 PRR23BQ6ZRT6 265 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 DNAJC19Q96DA6 116 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 ACCSQ96QU6 501 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 SMG9Q9H0W8 520 aaKnown RBP18.75■□□□□ 0.59
CRTC3-208ENST00000560098 TBC1D7Q9P0N9 293 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 CDV3Q9UKY7 258 aaKnown RBP18.75■□□□□ 0.59
CRTC3-208ENST00000560098 PCDHB5Q9Y5E4 795 aa18.75■□□□□ 0.59
CRTC3-208ENST00000560098 NUP210Q8TEM1 1887 aaPredicted RBP18.75■□□□□ 0.59
CRTC3-208ENST00000560098 CHURC1-FNTBB4DL54 471 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 K7ESF4 209 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 TULP1O00294 542 aaPredicted RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 GCNT3O95395 438 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 CENPBP07199 599 aaPredicted RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 FNTBP49356 437 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 ATXN1P54253 815 aaKnown RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 TFAMQ00059 246 aaKnown RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 TSPY1Q01534 308 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 CCINQ13939 588 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 SIM2Q14190 667 aaPredicted RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 ITPRIPL2Q3MIP1 535 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 LONP2Q86WA8 852 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 BRSK2Q8IWQ3 736 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 CMTM8Q8IZV2 173 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 SYNPOQ8N3V7 929 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 CLIC6Q96NY7 704 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 TMLHEQ9NVH6 421 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 HRO43593 1189 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 LDHAP00338 332 aaKnown RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 ITGB3P05106 788 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 RETP07949 1114 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 HMGA1P17096 107 aaKnown RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 POLR2BP30876 1174 aaKnown RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 CNR2P34972 360 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 AVPR1AP37288 418 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 WNT7BP56706 349 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 NLRP12P59046 1061 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 SPEM2Q0P670 501 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 NFE2Q16621 373 aaPredicted RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 TMEM150AQ86TG1 271 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 SAAL1Q96ER3 474 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 OLFML3Q9NRN5 406 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 RBAKQ9NYW8 714 aaPredicted RBP18.74■□□□□ 0.59
CRTC3-208ENST00000560098 AGAP1Q9UPQ3 857 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 PCDHB13Q9Y5F0 798 aa18.74■□□□□ 0.59
CRTC3-208ENST00000560098 PRPF40AO75400 957 aaKnown RBP18.73■□□□□ 0.59
CRTC3-208ENST00000560098 F11P03951 625 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 GARTP22102 1010 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 DDX6P26196 483 aaKnown RBP eCLIP18.73■□□□□ 0.59
CRTC3-208ENST00000560098 HEATR6Q6AI08 1181 aaKnown RBP18.73■□□□□ 0.59
CRTC3-208ENST00000560098 SYCP3Q8IZU3 236 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 PDCL2Q8N4E4 241 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 MAB21L3Q8N8X9 362 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms