RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 CUL4BQ13620 913 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 GRM2Q14416 872 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 MGAT5BQ3V5L5 792 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 LMBRD2Q68DH5 695 aaPredicted RBP22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 GAREM2Q75VX8 874 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 MFSD6LQ8IWD5 586 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 TMEM86AQ8N2M4 240 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 SPATA18Q8TC71 538 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 DEPDC1BQ8WUY9 529 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 SCFD1Q8WVM8 642 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 SLITRK6Q9H5Y7 841 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 BRD9Q9H8M2 597 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 LTB4R2Q9NPC1 389 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 AGPAT3Q9NRZ7 376 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 PTPRJQ12913 1337 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 RIF1Q5UIP0 2472 aaKnown RBP22■■□□□ 1.11
CHRNA3-207ENST00000559941 LRRN2O75325 713 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 TNNC2P02585 160 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 GLULP15104 373 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 ATF6P18850 670 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 CDR1P51861 262 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 TSPY1Q01534 308 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 VEPH1Q14D04 833 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 DUOXA2Q1HG44 320 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 TPRG1Q6ZUI0 275 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 CEP57L1Q8IYX8 460 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 OR5B17Q8NGF7 314 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 FAM200AQ8TCP9 573 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 E2F7Q96AV8 911 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 LPIN3Q9BQK8 851 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 ACBD6Q9BR61 282 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 TRPV5Q9NQA5 729 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 HEBP1Q9NRV9 189 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 TMLHEQ9NVH6 421 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 SERTAD1Q9UHV2 236 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 PCDHB5Q9Y5E4 795 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 SNX9Q9Y5X1 595 aa22■■□□□ 1.11
CHRNA3-207ENST00000559941 PATJQ8NI35 1801 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 GFRA3O60609 400 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 SLFN14P0C7P3 912 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 GABRR2P28476 465 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 GDI1P31150 447 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 MYL7Q01449 175 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 UBXN2BQ14CS0 331 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 NFE2Q16621 373 aaPredicted RBP21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 BMT2Q1RMZ1 405 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 STXBP5Q5T5C0 1151 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 FRMD5Q7Z6J6 570 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 WDR49Q8IV35 697 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 NELFCDQ8IXH7 590 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 TOP6BLQ8N6T0 577 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 IRF7Q92985 503 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 NELL2Q99435 816 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 MKNK1Q9BUB5 465 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 ATXN3LQ9H3M9 355 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 SLC39A2Q9NP94 309 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 DDX43Q9NXZ2 648 aaKnown RBP21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 ABI2Q9NYB9 513 aaPredicted RBP21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 ZDHHC9Q9Y397 364 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 R3HCC1Q9Y3T6 440 aaKnown RBP21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 MTF2Q9Y483 593 aaPredicted RBP21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 NCANO14594 1321 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 FANCMQ8IYD8 2048 aa21.99■■□□□ 1.11
CHRNA3-207ENST00000559941 ZNF638Q14966 1978 aaKnown RBP21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 FAM170BA6NMN3 283 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 HEPACAM2A8MVW5 462 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 CLIC2O15247 247 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 CD72P21854 359 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 LHX1P48742 406 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 SNRNP35Q16560 246 aaKnown RBP21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 ZNF852Q6ZMS4 543 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 DPH6Q7L8W6 267 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 OSTM1Q86WC4 334 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 C1orf210Q8IVY1 113 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 GRAMD1CQ8IYS0 662 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 XXYLT1Q8NBI6 393 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 GIPC2Q8TF65 315 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 LEO1Q8WVC0 666 aaPredicted RBP21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 IL21Q9HBE4 155 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 CGNQ9P2M7 1197 aaKnown RBP21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 DMDP11532 3685 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 FAM186AA6NE01 2351 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 OBSL1O75147 1896 aa21.98■■□□□ 1.11
CHRNA3-207ENST00000559941 PTPRZ1P23471 2315 aaPredicted RBP21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 VPS13AQ96RL7 3174 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 SHISA7A6NL88 538 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 GABRDO14764 452 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 ACTN4O43707 911 aaKnown RBP21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 KLRC4O43908 158 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 CMA1P23946 247 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 TARSP26639 723 aaKnown RBP21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 MAGEA9P43362 315 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 MYO1EQ12965 1108 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 SOWAHAQ2M3V2 549 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 ARHGAP15Q53QZ3 475 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 INTS6LQ5JSJ4 861 aaKnown RBP21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 GPR158Q5T848 1215 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 HS2ST1Q7LGA3 356 aa21.97■■□□□ 1.11
CHRNA3-207ENST00000559941 LIMS2Q7Z4I7 341 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms