RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 TESQ9UGI8 421 aaKnown RBP4.2□□□□□ -1.74
CASC4-210ENST00000559550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.2□□□□□ -1.743e-6■■□□□ 12.1
CASC4-210ENST00000559550 TOR1BO14657 336 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 ERC2O15083 957 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 UNC5CO95185 931 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 GCP02774 474 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 U2AF1L5P0DN76 240 aaPredicted RBP4.19□□□□□ -1.74
CASC4-210ENST00000559550 HKR1P10072 659 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 PIM1P11309 404 aaPredicted RBP4.19□□□□□ -1.74
CASC4-210ENST00000559550 SEC24CP53992 1094 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 USP14P54578 494 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 RPS7P62081 194 aaKnown RBP4.19□□□□□ -1.74
CASC4-210ENST00000559550 U2AF1Q01081 240 aaKnown RBP eCLIP4.19□□□□□ -1.74
CASC4-210ENST00000559550 FPGSQ05932 587 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 GALEQ14376 348 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 SF3B3Q15393 1217 aaKnown RBP4.19□□□□□ -1.74
CASC4-210ENST00000559550 HECTD2Q5U5R9 776 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 COLGALT2Q8IYK4 626 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 BBC3Q96PG8 261 aaPredicted RBP4.19□□□□□ -1.74
CASC4-210ENST00000559550 CASS4Q9NQ75 786 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 C1orf112Q9NSG2 853 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 TBCCD1Q9NVR7 557 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 L1RE1Q9UN81 338 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 MAST3O60307 1309 aa4.19□□□□□ -1.74
CASC4-210ENST00000559550 CAPN8A6NHC0 703 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 DCLK1O15075 740 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 GNAI2P04899 355 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 KITP10721 976 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 ATF3P18847 181 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 PLA2G5P39877 138 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 MPLP40238 635 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 KCNJ5P48544 419 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 HNRNPMP52272 730 aaKnown RBP eCLIP4.18□□□□□ -1.74
CASC4-210ENST00000559550 ZNF134P52741 427 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 ARFIP2P53365 341 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 PREPLQ4J6C6 727 aaPredicted RBP4.18□□□□□ -1.74
CASC4-210ENST00000559550 CYB5RLQ6IPT4 315 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 TSHZ1Q6ZSZ6 1077 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 MICALCLQ6ZW33 695 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 FAM9AQ8IZU1 332 aaPredicted RBP4.18□□□□□ -1.74
CASC4-210ENST00000559550 LNX2Q8N448 690 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 FAM46DQ8NEK8 389 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 IL31RAQ8NI17 732 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 SLC30A5Q8TAD4 765 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 LPIN2Q92539 896 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 SNX19Q92543 992 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 COQ10AQ96MF6 247 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 AIFM2Q9BRQ8 373 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 ADARB2Q9NS39 739 aaKnown RBP4.18□□□□□ -1.74
CASC4-210ENST00000559550 INTS13Q9NVM9 706 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 KCTD5Q9NXV2 234 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 OBP2AQ9NY56 170 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.18□□□□□ -1.74
CASC4-210ENST00000559550 CHPF2Q9P2E5 772 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 HESX1Q9UBX0 185 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 PACSIN3Q9UKS6 424 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 MED16Q9Y2X0 877 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 NEU2Q9Y3R4 380 aa4.18□□□□□ -1.74
CASC4-210ENST00000559550 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 GOLGA6CA6NDK9 693 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 GOLGA6BA6NDN3 693 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 E7ENX8 843 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 FAM227AF5H4B4 570 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 ESRRBO95718 433 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 NUDT3O95989 172 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 GOLGA6DP0CG33 693 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 PPP3CBP16298 524 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 TYRP1P17643 537 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 NPTX2P47972 431 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 UCP3P55916 312 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 TAP1Q03518 808 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 TAP2Q03519 686 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 HLXQ14774 488 aaPredicted RBP4.17□□□□□ -1.74
CASC4-210ENST00000559550 GFOD2Q3B7J2 385 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 FAM160B1Q5W0V3 765 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 SYCE2Q6PIF2 218 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 APOA5Q6Q788 366 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 Q6ZNX1 250 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 MAEAQ7L5Y9 396 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 SUPT20HQ8NEM7 779 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 DDX17Q92841 729 aaKnown RBP4.17□□□□□ -1.74
CASC4-210ENST00000559550 CAVIN3Q969G5 261 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 TIFAQ96CG3 184 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 TRIM54Q9BYV2 358 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 C22orf23Q9BZE7 217 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 TOR3AQ9H497 397 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 ALG13Q9NP73 1137 aaKnown RBP4.17□□□□□ -1.74
CASC4-210ENST00000559550 PIH1D1Q9NWS0 290 aaKnown RBP4.17□□□□□ -1.74
CASC4-210ENST00000559550 GOLGA6AQ9NYA3 693 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 RAD54BQ9Y620 910 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 USP19O94966 1318 aa4.17□□□□□ -1.74
CASC4-210ENST00000559550 A0A0B4J269 797 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 A0A1W2PPL8 197 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 VWC2LB2RUY7 222 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 TPP1O14773 563 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 TBX3O15119 743 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 GRPP07492 148 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 SRGNP10124 158 aa4.16□□□□□ -1.74
CASC4-210ENST00000559550 ZNF37AP17032 561 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms