RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 BECN1Q14457 450 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 DGKDQ16760 1214 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 ABCB5Q2M3G0 1257 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 CERKLQ49MI3 558 aaPredicted RBP5.87□□□□□ -1.47
CASC4-207ENST00000559037 USP30Q70CQ3 517 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 BMP8AQ7Z5Y6 402 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 C11orf74Q86VG3 221 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 RAET1EQ8TD07 263 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 ACER1Q8TDN7 264 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 SMCR8Q8TEV9 937 aaPredicted RBP5.87□□□□□ -1.47
CASC4-207ENST00000559037 GFM2Q969S9 779 aaKnown RBP5.87□□□□□ -1.47
CASC4-207ENST00000559037 C12orf42Q96LP6 360 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 TUBGCP5Q96RT8 1024 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 STRBPQ96SI9 672 aaKnown RBP5.87□□□□□ -1.47
CASC4-207ENST00000559037 C1QTNF3Q9BXJ4 246 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.87□□□□□ -1.47
CASC4-207ENST00000559037 KIAA1683Q9H0B3 1180 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 PUS7LQ9H0K6 701 aaKnown RBP5.87□□□□□ -1.47
CASC4-207ENST00000559037 TXNRD2Q9NNW7 524 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 MCM9Q9NXL9 1143 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 TMOD4Q9NZQ9 345 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 SAE1Q9UBE0 346 aaPredicted RBP5.87□□□□□ -1.47
CASC4-207ENST00000559037 NR2E1Q9Y466 385 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 MYPNQ86TC9 1320 aa5.87□□□□□ -1.47
CASC4-207ENST00000559037 TTC41PQ6P2S7 1318 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 SALL3Q9BXA9 1300 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 CYP2D7A0A087X1C5 515 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 A0A1W2PRG0 241 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 PATE3B3GLJ2 98 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 TNPO2O14787 897 aaKnown RBP5.86□□□□□ -1.47
CASC4-207ENST00000559037 H2AFYO75367 372 aaKnown RBP5.86□□□□□ -1.47
CASC4-207ENST00000559037 GJB1P08034 283 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 CYP2D6P10635 497 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 SLC9A1P19634 815 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 MRE11P49959 708 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 USP14P54578 494 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 SEPT2Q15019 361 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 DHCR24Q15392 516 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 SDE2Q6IQ49 451 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 ZSCAN25Q6NSZ9 544 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 KLHDC10Q6PID8 442 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 CATSPERGQ6ZRH7 1159 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 UBE2Q1Q7Z7E8 422 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 KBTBD3Q8NAB2 608 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 CHST13Q8NET6 341 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 DNERQ8NFT8 737 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 OR5AN1Q8NGI8 311 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 OTUD7AQ8TE49 926 aaPredicted RBP5.86□□□□□ -1.47
CASC4-207ENST00000559037 COA7Q96BR5 231 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 NEIL1Q96FI4 390 aaPredicted RBP5.86□□□□□ -1.47
CASC4-207ENST00000559037 DYNLL2Q96FJ2 89 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 LOXL4Q96JB6 756 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 CCDC17Q96LX7 622 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 CDK5RAP1Q96SZ6 601 aaKnown RBP5.86□□□□□ -1.47
CASC4-207ENST00000559037 TOMM22Q9NS69 142 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 SWAP70Q9UH65 585 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 SYNPO2Q9UMS6 1093 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 OAZ3Q9UMX2 235 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 MYH7BA7E2Y1 1941 aa5.86□□□□□ -1.47
CASC4-207ENST00000559037 A0A0G2JMZ2 1700 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 A0A087X0B3 334 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 RNF113AO15541 343 aaKnown RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 CNMDO75829 334 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 SGPL1O95470 568 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 ZFYP08048 801 aaPredicted RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 CCL5P13501 91 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 CAPN2P17655 700 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 PTX3P26022 381 aaPredicted RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 RPS19P39019 145 aaKnown RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 BUD31P41223 144 aaPredicted RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 IRX3P78415 501 aaPredicted RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 PCOLCEQ15113 449 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 C21orf62-AS1Q17RA5 79 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 SBK1Q52WX2 424 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 HS1BP3Q53T59 392 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 KIAA1755Q5JYT7 1200 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 PRAMEF9Q5VWM5 478 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 ESRP1Q6NXG1 681 aaKnown RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 GIMAP6Q6P9H5 292 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 CTR9Q6PD62 1173 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 TMEM179Q6ZVK1 233 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 KANSL1Q7Z3B3 1105 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 SMC5Q8IY18 1101 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 SLC44A5Q8NCS7 719 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 GPRC5AQ8NFJ5 357 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 USP6NLQ92738 828 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 PITHD1Q9GZP4 211 aaPredicted RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 HAPLN2Q9GZV7 340 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 WNT8AQ9H1J5 351 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 PORCNQ9H237 461 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 THG1LQ9NWX6 298 aaKnown RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 HOXC10Q9NYD6 342 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 STAP2Q9UGK3 403 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 PUF60Q9UHX1 559 aaKnown RBP5.85□□□□□ -1.47
CASC4-207ENST00000559037 RABGAP1Q9Y3P9 1069 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 SLC4A4Q9Y6R1 1079 aa5.85□□□□□ -1.47
CASC4-207ENST00000559037 ZNF891A8MT65 544 aaPredicted RBP5.84□□□□□ -1.47
CASC4-207ENST00000559037 ERC2O15083 957 aa5.84□□□□□ -1.47
CASC4-207ENST00000559037 GPR42O15529 346 aa5.84□□□□□ -1.47
CASC4-207ENST00000559037 IGHDP01880 384 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms