RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 BTLAQ7Z6A9 289 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 CEP57Q86XR8 500 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 LNX1Q8TBB1 728 aaPredicted RBP6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 HPS3Q969F9 1004 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 SPATA32Q96LK8 384 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 CLSTN3Q9BQT9 956 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 PHF7Q9BWX1 381 aaPredicted RBP6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 ADAM7Q9H2U9 754 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 POMKQ9H5K3 350 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 RUBCNLQ9H714 662 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 MAGEF1Q9HAY2 307 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 MAN1C1Q9NR34 630 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 SCN1AP35498 2009 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 DOCK8Q8NF50 2099 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 A0A1W2PNR3 127 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 TGM5O43548 720 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 GLUD1P00367 558 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 NFICP08651 508 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 TKTP29401 623 aaKnown RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 LRPAP1P30533 357 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 RPL9P32969 192 aaKnown RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 GUCY2FP51841 1108 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 ASIC1P78348 528 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 KRT85P78386 507 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 PPP2R3AQ06190 1150 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 BECN1Q14457 450 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 PSMD5Q16401 504 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 ADALQ6DHV7 355 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 LILRA6Q6PI73 481 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 CRELD2Q6UXH1 353 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 RSPO2Q6UXX9 243 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 PALB2Q86YC2 1186 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 CCDC65Q8IXS2 484 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 GRAMD1CQ8IYS0 662 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZSWIM2Q8NEG5 633 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 ACCSQ96QU6 501 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 POP1Q99575 1024 aaKnown RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 C7orf25Q9BPX7 421 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 LRRC27Q9C0I9 530 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 EPHX3Q9H6B9 360 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 SFXN1Q9H9B4 322 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 RPF1Q9H9Y2 349 aaKnown RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 FAM13BQ9NYF5 915 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 DNMT3LQ9UJW3 386 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 AGO2Q9UKV8 859 aaKnown RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 KCNH3Q9ULD8 1083 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 UBQLN1Q9UMX0 589 aaKnown RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 HPSEQ9Y251 543 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 TECTAO75443 2155 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 MYO10Q9HD67 2058 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 A0A1B0GVL5 298 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 PPEF2O14830 753 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 PRPF40AO75400 957 aaKnown RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 RFPL2O75678 378 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 PRPF6O94906 941 aaKnown RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 C1RP00736 705 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 SLFN14P0C7P3 912 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 SPATA31D3P0C874 917 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 PFKFB1P16118 471 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 CYP3A5P20815 502 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 SP100P23497 879 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 CMA1P23946 247 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 HOXD13P35453 343 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 MTHFRP42898 656 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 ARSDP51689 593 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 AMPD3Q01432 767 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 CREMQ03060 361 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 CUL4BQ13620 913 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 ALCAMQ13740 583 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 PKDCCQ504Y2 493 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 FAM26FQ5R3K3 315 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 SPATA1Q5VX52 437 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 JADE1Q6IE81 842 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 SLFN12LQ6IEE8 588 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 CES5AQ6NT32 575 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 SPATA31D4Q6ZUB0 917 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 EPM2AIP1Q7L775 607 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 GPR149Q86SP6 731 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 POMGNT1Q8WZA1 660 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 SAAL1Q96ER3 474 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 RPGRIP1Q96KN7 1286 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 BLZF1Q9H2G9 400 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 MTRRQ9UBK8 725 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 EXOC7Q9UPT5 735 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 GPC6Q9Y625 555 aaPredicted RBP6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 TSC2P49815 1807 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZDBF2Q9HCK1 2354 aa6.53□□□□□ -1.36
CTDSPL2-204ENST00000558966 FAM237AA0A1B0GTK4 181 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 PI4K2BG5E9Z4 385 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 AXIN1O15169 862 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 TRAPPC3O43617 180 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 KLRC4O43908 158 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 TBC1D4O60343 1298 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 PAPLNO95428 1278 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 TCF3P15923 654 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 GARTP22102 1010 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 VAMP1P23763 118 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 OR1D2P34982 312 aa6.52□□□□□ -1.37
CTDSPL2-204ENST00000558966 AFMP43652 599 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms