RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 NRG2O14511 850 aaPredicted RBP12.92□□□□□ -0.34
TPM1-216ENST00000558910 HUS1O60921 280 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 PHACTR2O75167 634 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 TECTAO75443 2155 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 VNN2O95498 520 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 PTPN2P17706 415 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 TYMPP19971 482 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 SCN1AP35498 2009 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 GGCXP38435 758 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 AARSP49588 968 aaKnown RBP eCLIP12.92□□□□□ -0.34
TPM1-216ENST00000558910 RBP5P82980 135 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 CYP24A1Q07973 514 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 EHHADHQ08426 723 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 SIGLEC14Q08ET2 396 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 CCDC142Q17RM4 750 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 SLC5A9Q2M3M2 681 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 UVSSAQ2YD98 709 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 MGAT5BQ3V5L5 792 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 SDHAF4Q5VUM1 108 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 CEP135Q66GS9 1140 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 IQCEQ6IPM2 695 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 CNNM4Q6P4Q7 775 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 PARM1Q6UWI2 310 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 FLCNQ8NFG4 579 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 GIPC2Q8TF65 315 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 FGF13Q92913 245 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 ZNF512Q96ME7 567 aaPredicted RBP12.92□□□□□ -0.34
TPM1-216ENST00000558910 TSPAN18Q96SJ8 248 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 MMS19Q96T76 1030 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 LPIN3Q9BQK8 851 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 MFSD1Q9H3U5 465 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 SLITRK6Q9H5Y7 841 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 INTS13Q9NVM9 706 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 ABI2Q9NYB9 513 aaPredicted RBP12.92□□□□□ -0.34
TPM1-216ENST00000558910 CEP72Q9P209 647 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 USP25Q9UHP3 1055 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 SIX4Q9UIU6 781 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 L1RE1Q9UN81 338 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 HCN4Q9Y3Q4 1203 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 NUMBLQ9Y6R0 609 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 UBE4BO95155 1302 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 ANK1P16157 1881 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 MTMR11A4FU01 709 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 OAZ2O95190 189 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 PDGFRBP09619 1106 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 LAMP2P13473 410 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 RFX1P22670 979 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 ALDH1A3P47895 512 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 DPYDQ12882 1025 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 BIRC3Q13489 604 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 TDGQ13569 410 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 DUOXA2Q1HG44 320 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 TPGS2Q68CL5 300 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 PDZD4Q76G19 769 aaPredicted RBP12.91□□□□□ -0.34
TPM1-216ENST00000558910 LRRTM3Q86VH5 581 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 OSTM1Q86WC4 334 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 SUGP1Q8IWZ8 645 aaKnown RBP12.91□□□□□ -0.34
TPM1-216ENST00000558910 TCEAL8Q8IYN2 117 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 PDCL2Q8N4E4 241 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 FGF14Q92915 247 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 EEF2KMTQ96G04 330 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 BORCS6Q96GS4 357 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 HPDLQ96IR7 371 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 RTP3Q9BQQ7 232 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 PI4K2AQ9BTU6 479 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 DDX43Q9NXZ2 648 aaKnown RBP12.91□□□□□ -0.34
TPM1-216ENST00000558910 ITGA11Q9UKX5 1188 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 CDH7Q9ULB5 785 aa12.91□□□□□ -0.34
TPM1-216ENST00000558910 MTCL1Q9Y4B5 1905 aaKnown RBP12.91□□□□□ -0.34
TPM1-216ENST00000558910 GADD45BO75293 160 aaPredicted RBP12.9□□□□□ -0.34
TPM1-216ENST00000558910 S1PR4O95977 384 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 ADH1BP00325 375 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 CST3P01034 146 aaPredicted RBP12.9□□□□□ -0.34
TPM1-216ENST00000558910 CD46P15529 392 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 HOXA9P31269 272 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 CCR2P41597 374 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 GPR15P49685 360 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 EPHB3P54753 998 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 VCPP55072 806 aaKnown RBP12.9□□□□□ -0.34
TPM1-216ENST00000558910 PSMC1P62191 440 aaKnown RBP12.9□□□□□ -0.34
TPM1-216ENST00000558910 MYO1EQ12965 1108 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 GPR17Q13304 367 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 TRPC3Q13507 836 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 TAF12Q16514 161 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 CYP4A22Q5TCH4 519 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 CYP26C1Q6V0L0 522 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 SCARA5Q6ZMJ2 495 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 TRAPPC11Q7Z392 1133 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 NT5DC4Q86YG4 428 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 ADGRF2Q8IZF7 708 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 SIX5Q8N196 739 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 TTC16Q8NEE8 873 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 PLEKHO2Q8TD55 490 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 CGRRF1Q99675 332 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 RHOBTB2Q9BYZ6 727 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 KIAA1586Q9HCI6 787 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 TMLHEQ9NVH6 421 aa12.9□□□□□ -0.34
TPM1-216ENST00000558910 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.9□□□□□ -0.34
TPM1-216ENST00000558910 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms