RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ALKAL1Q6UXT8 129 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 LPCAT2Q7L5N7 544 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 TMEM150AQ86TG1 271 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 ZBTB8OSQ8IWT0 167 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 CMTM8Q8IZV2 173 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 BLIDQ8IZY5 108 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 USP33Q8TEY7 942 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 FAM20AQ96MK3 541 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 RNF26Q9BY78 433 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-206ENST00000558739 POLD4Q9HCU8 107 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 ZDHHC4Q9NPG8 344 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 TUBGCP4Q9UGJ1 667 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 TPCN1Q9ULQ1 816 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 RELNP78509 3460 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 LARGE1O95461 756 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 WEE1P30291 646 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 ALDH1A3P47895 512 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 AKAP17AQ02040 695 aaKnown RBP12.98□□□□□ -0.33
SMAD3-206ENST00000558739 MESP2Q0VG99 397 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 PTPAQ15257 358 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 XKR4Q5GH76 650 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 CENPPQ6IPU0 288 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 MAB21L3Q8N8X9 362 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 TTC16Q8NEE8 873 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 BRF1Q92994 677 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 CD101Q93033 1021 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
SMAD3-206ENST00000558739 DCBLD2Q96PD2 775 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 HNRNPABQ99729 332 aaKnown RBP12.98□□□□□ -0.33
SMAD3-206ENST00000558739 HSD17B14Q9BPX1 270 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 ESYT1Q9BSJ8 1104 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 DACH1Q9UI36 760 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 MAFFQ9ULX9 164 aa12.98□□□□□ -0.33
SMAD3-206ENST00000558739 MYOFQ9NZM1 2061 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 FAM205CA6NFA0 338 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 J3QKU1 62 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 GJB3O75712 270 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 CHRM1P11229 460 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-206ENST00000558739 YWHAHQ04917 246 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-206ENST00000558739 GFPT1Q06210 699 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-206ENST00000558739 MAP7D1Q3KQU3 841 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 ATF7IP2Q5U623 682 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 PCSK4Q6UW60 755 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 NAXDQ8IW45 347 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 CDT1Q9H211 546 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 ECT2Q9H8V3 914 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 POLMQ9NP87 494 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-206ENST00000558739 SH3GLB2Q9NR46 395 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 ANKEF1Q9NU02 776 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 DKK4Q9UBT3 224 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 PCDHB8Q9UN66 801 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 SLC6A14Q9UN76 642 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 KCNJ14Q9UNX9 436 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 WNT6Q9Y6F9 365 aa12.97□□□□□ -0.33
SMAD3-206ENST00000558739 TLN1Q9Y490 2541 aaKnown RBP12.97□□□□□ -0.33
SMAD3-206ENST00000558739 FAM149AA5PLN7 773 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 K7EQS6 105 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 MAP3K13O43283 966 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 MARCH6O60337 910 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 CCNT1O60563 726 aaKnown RBP12.96□□□□□ -0.33
SMAD3-206ENST00000558739 LYPLA2O95372 231 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 CCT2P78371 535 aaKnown RBP12.96□□□□□ -0.33
SMAD3-206ENST00000558739 CRY1Q16526 586 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 EARS2Q5JPH6 523 aaKnown RBP12.96□□□□□ -0.33
SMAD3-206ENST00000558739 TXNDC8Q6A555 127 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 PPP4R3AQ6IN85 833 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 Q6ZUG5 572 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 TOGARAM2Q6ZUX3 1019 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 APPL2Q8NEU8 664 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 SEPT5Q99719 369 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-206ENST00000558739 C22orf23Q9BZE7 217 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 DNAAF2Q9NVR5 837 aaKnown RBP12.96□□□□□ -0.33
SMAD3-206ENST00000558739 MMP17Q9ULZ9 603 aa12.96□□□□□ -0.33
SMAD3-206ENST00000558739 TK2O00142 265 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 ARHGAP33O14559 1287 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 DTNBO60941 627 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 OAZ2O95190 189 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 SERPINF2P08697 491 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 IFNAR1P17181 557 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 GRM5P41594 1212 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 ABCG1P45844 678 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 BFSP1Q12934 665 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 GPR17Q13304 367 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 NEK8Q86SG6 692 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 ALLCQ8N6M5 410 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 OR10T2Q8NGX3 314 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 GIPC2Q8TF65 315 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 HMGB4Q8WW32 186 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 SPACA7Q96KW9 195 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 C2orf40Q9H1Z8 148 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 SLC38A7Q9NVC3 462 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 TOR4AQ9NXH8 423 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
SMAD3-206ENST00000558739 COL5A1P20908 1838 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-206ENST00000558739 BSNQ9UPA5 3926 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 TRABD2BA6NFA1 517 aa12.94□□□□□ -0.34
SMAD3-206ENST00000558739 M0QZQ0 153 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms