RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 TEX28O15482 410 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 ADAM12O43184 909 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 TBC1D4O60343 1298 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 CLASP2O75122 1294 aaKnown RBP11.13□□□□□ -0.63
PSMA4-207ENST00000558635 OAZ2O95190 189 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 ATP1A3P13637 1013 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 KLRC2P26717 231 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 OR1D2P34982 312 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 GTF2F1P35269 517 aaKnown RBP eCLIP11.13□□□□□ -0.63
PSMA4-207ENST00000558635 NOP14P78316 857 aaKnown RBP11.13□□□□□ -0.63
PSMA4-207ENST00000558635 CREMQ03060 361 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 HYAL1Q12794 435 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 CETN1Q12798 172 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 CTXN3Q4LDR2 81 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 WDR44Q5JSH3 913 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 MIIPQ5JXC2 388 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 ZNF280DQ6N043 979 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 SCARA5Q6ZMJ2 495 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 DPH6Q7L8W6 267 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 GLYCTKQ8IVS8 523 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 ADGRF2Q8IZF7 708 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 TMEM86AQ8N2M4 240 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 EHBP1Q8NDI1 1231 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 FAM200AQ8TCP9 573 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 PPP2R3CQ969Q6 453 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 CLSTN3Q9BQT9 956 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 VPS16Q9H269 839 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 NDST4Q9H3R1 872 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 IGFLR1Q9H665 355 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 SMYD3Q9H7B4 428 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 MTRRQ9UBK8 725 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 LIMA1Q9UHB6 759 aaKnown RBP11.13□□□□□ -0.63
PSMA4-207ENST00000558635 FBXL5Q9UKA1 691 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 BACE2Q9Y5Z0 518 aa11.13□□□□□ -0.63
PSMA4-207ENST00000558635 PRRC2BQ5JSZ5 2229 aaKnown RBP11.13□□□□□ -0.63
PSMA4-207ENST00000558635 ADH1AP07327 375 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 P4HA1P13674 534 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 WARSP23381 471 aaKnown RBP11.12□□□□□ -0.63
PSMA4-207ENST00000558635 RAP1GAPP47736 663 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 NDUFV1P49821 464 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 COPB1P53618 953 aaKnown RBP11.12□□□□□ -0.63
PSMA4-207ENST00000558635 CDH8P55286 799 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 ARPP19P56211 112 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 LRMPQ12912 555 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 DUSP6Q16828 381 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 TJAP1Q5JTD0 557 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 OSTM1Q86WC4 334 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 PALB2Q86YC2 1186 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 THEM5Q8N1Q8 247 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 ANKRD20A12PQ8NF67 263 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 LMO3Q8TAP4 145 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 KBTBD7Q8WVZ9 684 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 PPM1EQ8WY54 764 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 RTP3Q9BQQ7 232 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 MRPL45Q9BRJ2 306 aaKnown RBP11.12□□□□□ -0.63
PSMA4-207ENST00000558635 CRACR2AQ9BSW2 395 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 NIF3L1Q9GZT8 377 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 INTS2Q9H0H0 1204 aaKnown RBP11.12□□□□□ -0.63
PSMA4-207ENST00000558635 SDCBP2Q9H190 292 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 CDY1Q9Y6F8 540 aa11.12□□□□□ -0.63
PSMA4-207ENST00000558635 GTPBP10A4D1E9 387 aaKnown RBP11.11□□□□□ -0.63
PSMA4-207ENST00000558635 LRRC10BA6NIK2 292 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 OR6C75A6NL08 312 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 GOLGA6L19H0YKK7 550 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 GABRDO14764 452 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 HCRTO43612 131 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 TACC1O75410 805 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 TPM2P07951 284 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 PDGFRBP09619 1106 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 WEE2P0C1S8 567 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 FAM163BP0C2L3 166 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 OR4Q2P0C623 313 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 LMO2P25791 158 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
PSMA4-207ENST00000558635 ASPAP45381 313 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 LHX1P48742 406 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 TPM4P67936 248 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 RAB33AQ14088 237 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 EXOC3L4Q17RC7 722 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 SLC8B1Q6J4K2 584 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 LLGL2Q6P1M3 1020 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 GBP6Q6ZN66 633 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 APTXQ7Z2E3 356 aaKnown RBP11.11□□□□□ -0.63
PSMA4-207ENST00000558635 OR6B3Q8NGW1 331 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 OR10T2Q8NGX3 314 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 SPATA18Q8TC71 538 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 SLC22A17Q8WUG5 538 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 TMEM209Q96SK2 561 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 CDCA3Q99618 268 aaPredicted RBP11.11□□□□□ -0.63
PSMA4-207ENST00000558635 OXCT2Q9BYC2 517 aaPredicted RBP11.11□□□□□ -0.63
PSMA4-207ENST00000558635 BCO2Q9BYV7 579 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 SNX25Q9H3E2 840 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
PSMA4-207ENST00000558635 GCNT4Q9P109 453 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 VWA8A3KMH1 1905 aa11.11□□□□□ -0.63
PSMA4-207ENST00000558635 LINC01565O15544 149 aa11.1□□□□□ -0.63
PSMA4-207ENST00000558635 TGM5O43548 720 aa11.1□□□□□ -0.63
PSMA4-207ENST00000558635 GLUD1P00367 558 aa11.1□□□□□ -0.63
PSMA4-207ENST00000558635 SPATA31D3P0C874 917 aa11.1□□□□□ -0.63
PSMA4-207ENST00000558635 CPB1P15086 417 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms