RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 XYLBO75191 536 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 TACC1O75410 805 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 PAPLNO95428 1278 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 VNN2O95498 520 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 GNA14O95837 355 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 P4HA1P13674 534 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 SP100P23497 879 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-205ENST00000558428 PCSK1P29120 753 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 CDR1P51861 262 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 ZP2Q05996 745 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 TPD52L1Q16890 204 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-205ENST00000558428 INTS6LQ5JSJ4 861 aaKnown RBP13.23□□□□□ -0.29
SMAD3-205ENST00000558428 SPOPLQ6IQ16 392 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 SCARA5Q6ZMJ2 495 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 LRRTM3Q86VH5 581 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 ATAD1Q8NBU5 361 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 CCDC150Q8NCX0 1101 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 OR6B3Q8NGW1 331 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 TAS1R2Q8TE23 839 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 TAF4BQ92750 862 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 SLC35C1Q96A29 364 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 MRPL45Q9BRJ2 306 aaKnown RBP13.23□□□□□ -0.29
SMAD3-205ENST00000558428 PI4K2AQ9BTU6 479 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 COL25A1Q9BXS0 654 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-205ENST00000558428 RHOBTB2Q9BYZ6 727 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 SNX25Q9H3E2 840 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 SMYD3Q9H7B4 428 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.23□□□□□ -0.296e-9■■■■■ 121.6
SMAD3-205ENST00000558428 DOCK8Q8NF50 2099 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 ASS1P00966 412 aaKnown RBP13.22□□□□□ -0.29
SMAD3-205ENST00000558428 PDGFRBP09619 1106 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 FAM163BP0C2L3 166 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 CCDC192P0DO97 292 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 SSTR3P32745 418 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-205ENST00000558428 GNL1P36915 607 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-205ENST00000558428 RAP1GAPP47736 663 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 NOP14P78316 857 aaKnown RBP13.22□□□□□ -0.29
SMAD3-205ENST00000558428 TWF1Q12792 350 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 SMARCB1Q12824 385 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 DUSP4Q13115 394 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 SASS6Q6UVJ0 657 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 GRASPQ7Z6J2 395 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-205ENST00000558428 FBXL13Q8NEE6 735 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 RPGRIP1Q96KN7 1286 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 MED15Q96RN5 788 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 SYT15Q9BQS2 421 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 CRISPLD1Q9H336 500 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 WDR6Q9NNW5 1121 aaKnown RBP13.22□□□□□ -0.29
SMAD3-205ENST00000558428 ABI2Q9NYB9 513 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-205ENST00000558428 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 CDH9Q9ULB4 789 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 SLC27A5Q9Y2P5 690 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 YIPF1Q9Y548 306 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 MYO10Q9HD67 2058 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 NOTCH4Q99466 2003 aa13.22□□□□□ -0.29
SMAD3-205ENST00000558428 CUL9Q8IWT3 2517 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 CLUHO75153 1309 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 LRRN2O75325 713 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 POU2F2P09086 479 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 LMO2P25791 158 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 ERCC5P28715 1186 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-205ENST00000558428 ALDH1A3P47895 512 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 CDH8P55286 799 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 MARSP56192 900 aaKnown RBP13.21□□□□□ -0.29
SMAD3-205ENST00000558428 PSMC1P62191 440 aaKnown RBP13.21□□□□□ -0.29
SMAD3-205ENST00000558428 NFE2Q16621 373 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-205ENST00000558428 MGAT5BQ3V5L5 792 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 CAVIN1Q6NZI2 390 aaKnown RBP13.21□□□□□ -0.29
SMAD3-205ENST00000558428 CREBRFQ8IUR6 639 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 GJD3Q8N144 294 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 ELMOD1Q8N336 334 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 TTC9BQ8N6N2 239 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 SPPL2BQ8TCT7 592 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 C2orf15Q8WU43 125 aaKnown RBP13.21□□□□□ -0.29
SMAD3-205ENST00000558428 SEMA4DQ92854 862 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 CNOT6LQ96LI5 555 aaKnown RBP13.21□□□□□ -0.29
SMAD3-205ENST00000558428 SEPT5Q99719 369 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-205ENST00000558428 APOBEC3GQ9HC16 384 aaKnown RBP13.21□□□□□ -0.29
SMAD3-205ENST00000558428 TMLHEQ9NVH6 421 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 RAB20Q9NX57 234 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 GTF3C4Q9UKN8 822 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 NR2E1Q9Y466 385 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 PCDHB5Q9Y5E4 795 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 MYH10P35580 1976 aa13.21□□□□□ -0.29
SMAD3-205ENST00000558428 PTPRDP23468 1912 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 MYBPHLA2RUH7 354 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 C19orf67A6NJJ6 358 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 A8MXQ7 604 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 N4BP1O75113 896 aaKnown RBP13.2□□□□□ -0.3
SMAD3-205ENST00000558428 ATP2C2O75185 946 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 SOAT2O75908 522 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 PTMSP20962 102 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 ASPAP45381 313 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 FMO5P49326 533 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 TUFMP49411 452 aaKnown RBP13.2□□□□□ -0.3
SMAD3-205ENST00000558428 NTHL1P78549 312 aa13.2□□□□□ -0.3
SMAD3-205ENST00000558428 PLD1Q13393 1074 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms