RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 WDR72Q3MJ13 1102 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 PABPC1LQ4VXU2 614 aaKnown RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 LMBRD2Q68DH5 695 aaPredicted RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 FOXR2Q6PJQ5 311 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 RNF19BQ6ZMZ0 732 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 LIMS2Q7Z4I7 341 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 GRASPQ7Z6J2 395 aaPredicted RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 ITIH5Q86UX2 942 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 ADSSL1Q8N142 457 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 PDCL2Q8N4E4 241 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 TRIML1Q8N9V2 468 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 SPPL2BQ8TCT7 592 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 ZNF516Q92618 1163 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 TAF4BQ92750 862 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 EDAQ92838 391 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 IPO9Q96P70 1041 aaKnown RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 MMS19Q96T76 1030 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 GPR88Q9GZN0 384 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 VRTNQ9H8Y1 702 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 DDX43Q9NXZ2 648 aaKnown RBP9.1□□□□□ -0.95
TPM1-213ENST00000558400 GDE1Q9NZC3 331 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 EPS15L1Q9UBC2 864 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 SORCS3Q9UPU3 1222 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 INSL5Q9Y5Q6 135 aa9.1□□□□□ -0.95
TPM1-213ENST00000558400 BICDL2A1A5D9 508 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 LRRIQ3A6PVS8 624 aaPredicted RBP9.09□□□□□ -0.95
TPM1-213ENST00000558400 GOLGA6L22H0YM25 854 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 TACC1O75410 805 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 SEC24AO95486 1093 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 FGF19O95750 216 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 RHOP08100 348 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 EPB41P11171 864 aaKnown RBP9.09□□□□□ -0.95
TPM1-213ENST00000558400 TRIM21P19474 475 aaKnown RBP9.09□□□□□ -0.95
TPM1-213ENST00000558400 GNL1P36915 607 aaPredicted RBP9.09□□□□□ -0.95
TPM1-213ENST00000558400 CASP4P49662 377 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 TNNC1P63316 161 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 ZXDAP98168 799 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 TWF1Q12792 350 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 BIRC3Q13489 604 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 NCOA4Q13772 614 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 PTPN21Q16825 1174 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 SOWAHAQ2M3V2 549 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 SLC39A12Q504Y0 691 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 ZCWPW2Q504Y3 356 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 FAM186BQ8IYM0 893 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 ADGRF2Q8IZF7 708 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 TMEM130Q8N3G9 435 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 ATAD1Q8NBU5 361 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 CCDC150Q8NCX0 1101 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 GBP4Q96PP9 640 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 IMPG2Q9BZV3 1241 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 DNAI2Q9GZS0 605 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 ABCB6Q9NP58 842 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 DNMT3BQ9UBC3 853 aaKnown RBP9.09□□□□□ -0.95
TPM1-213ENST00000558400 MUTYHQ9UIF7 546 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 CDH22Q9UJ99 828 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 CDH9Q9ULB4 789 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 CDH7Q9ULB5 785 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 L1RE1Q9UN81 338 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 MRPS23Q9Y3D9 190 aaKnown RBP9.09□□□□□ -0.95
TPM1-213ENST00000558400 PCDHB5Q9Y5E4 795 aa9.09□□□□□ -0.95
TPM1-213ENST00000558400 MTCL1Q9Y4B5 1905 aaKnown RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 MTMR11A4FU01 709 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 AKAP3O75969 853 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 FGFR1OPO95684 399 aaKnown RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 OR4Q2P0C623 313 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 PYGBP11216 843 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 WARSP23381 471 aaKnown RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 SP100P23497 879 aaPredicted RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 CCNE1P24864 410 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 EPHA5P54756 1037 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 MYL6P60660 151 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 RPL10AP62906 217 aaKnown RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 TDGQ13569 410 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 MTMR3Q13615 1198 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 VEPH1Q14D04 833 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 TAF12Q16514 161 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 ZACNQ401N2 412 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 ZNF667Q5HYK9 610 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 INTS6LQ5JSJ4 861 aaKnown RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 C4orf50Q6ZRC1 276 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 MTSS1LQ765P7 747 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 PDZD4Q76G19 769 aaPredicted RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 SV2AQ7L0J3 742 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 ERMP1Q7Z2K6 904 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 DNAJB7Q7Z6W7 309 aaPredicted RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 FILIP1Q7Z7B0 1213 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 LRRTM3Q86VH5 581 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 OR10T2Q8NGX3 314 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 FGF13Q92913 245 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 FUBP3Q96I24 572 aaKnown RBP eCLIP9.08□□□□□ -0.96
TPM1-213ENST00000558400 FAXDC2Q96IV6 333 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 CEP295NLQ96MC4 621 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 PGLYRP2Q96PD5 576 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 PRRX2Q99811 253 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 RTP3Q9BQQ7 232 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 CORO1BQ9BR76 489 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 GZF1Q9H116 711 aaPredicted RBP9.08□□□□□ -0.96
TPM1-213ENST00000558400 SNX25Q9H3E2 840 aa9.08□□□□□ -0.96
TPM1-213ENST00000558400 KCNK12Q9HB15 430 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms