RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 GPR15P49685 360 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 ZNF528Q3MIS6 628 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 BRSK2Q8IWQ3 736 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 CCDC65Q8IXS2 484 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 RUBCNQ92622 972 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 HPS3Q969F9 1004 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 ZSCAN16Q9H4T2 348 aaPredicted RBP16.74■□□□□ 0.27
TPM1-211ENST00000558314 PDE11AQ9HCR9 933 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
TPM1-211ENST00000558314 ZSCAN32Q9NX65 697 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 PCDHB5Q9Y5E4 795 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 TICRRQ7Z2Z1 1910 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 VPS13AQ96RL7 3174 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 GVINP1Q7Z2Y8 2422 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 CHADO15335 359 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 HUS1O60921 280 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 PRAMEF12O95522 483 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 LDHAP00338 332 aaKnown RBP16.73■□□□□ 0.27
TPM1-211ENST00000558314 HAPLN1P10915 354 aaPredicted RBP16.73■□□□□ 0.27
TPM1-211ENST00000558314 CDC25CP30307 473 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 PNPLA4P41247 253 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 FZD5Q13467 585 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 LPAL2Q16609 132 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 SCARA3Q6AZY7 606 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 PDCL2Q8N4E4 241 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 C1orf127Q8N9H9 656 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 SPPL2BQ8TCT7 592 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 DHX58Q96C10 678 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 INTS4Q96HW7 963 aaKnown RBP16.73■□□□□ 0.27
TPM1-211ENST00000558314 STRA6Q9BX79 667 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 MTMR12Q9C0I1 747 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 TASP1Q9H6P5 420 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 TMLHEQ9NVH6 421 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 DDX43Q9NXZ2 648 aaKnown RBP16.73■□□□□ 0.27
TPM1-211ENST00000558314 GTSE1Q9NYZ3 720 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 L1RE1Q9UN81 338 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 PCDHGA2Q9Y5H1 932 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 SNX9Q9Y5X1 595 aa16.73■□□□□ 0.27
TPM1-211ENST00000558314 SPTBN4Q9H254 2564 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 SPTLC2O15270 562 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 EXTL3O43909 919 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 HSP90AA1P07900 732 aaKnown RBP16.72■□□□□ 0.27
TPM1-211ENST00000558314 GARTP22102 1010 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 ASIC1P78348 528 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 TNK2Q07912 1038 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 ALCAMQ13740 583 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 NT5DC4Q86YG4 428 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 SUMF1Q8NBK3 374 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 GLIS3Q8NEA6 775 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 BPIFB1Q8TDL5 484 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 C2orf15Q8WU43 125 aaKnown RBP16.72■□□□□ 0.27
TPM1-211ENST00000558314 BORCS6Q96GS4 357 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
TPM1-211ENST00000558314 LRRC3BQ96PB8 259 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 MKNK1Q9BUB5 465 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 BACH2Q9BYV9 841 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 CHRDQ9H2X0 955 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 TMEM206Q9H813 350 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 OLFML3Q9NRN5 406 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 SMG5Q9UPR3 1016 aaKnown RBP16.72■□□□□ 0.27
TPM1-211ENST00000558314 TSC2P49815 1807 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 TCHHQ07283 1943 aa16.72■□□□□ 0.27
TPM1-211ENST00000558314 HCRTO43612 131 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 CLSTN1O94985 981 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 AVPR1AP37288 418 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 RBP5P82980 135 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 MYL7Q01449 175 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 POU5F1Q01860 360 aaKnown RBP16.71■□□□□ 0.27
TPM1-211ENST00000558314 SMARCB1Q12824 385 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 PPP2R5DQ14738 602 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 PON2Q15165 354 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 DDR2Q16832 855 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 ARHGAP29Q52LW3 1261 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 PRR23BQ6ZRT6 265 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 STXBP4Q6ZWJ1 553 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 SCN4BQ8IWT1 228 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 GPD1LQ8N335 351 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 MAB21L3Q8N8X9 362 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 LINC00301Q8NCQ3 95 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 ANKRD36BP1Q96IX9 119 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 SLC46A2Q9BY10 475 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 C8orf33Q9H7E9 229 aaPredicted RBP16.71■□□□□ 0.27
TPM1-211ENST00000558314 IL21Q9HBE4 155 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 TRPC7Q9HCX4 862 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 TRPV5Q9NQA5 729 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 PRMT8Q9NR22 394 aaPredicted RBP16.71■□□□□ 0.27
TPM1-211ENST00000558314 THG1LQ9NWX6 298 aaKnown RBP16.71■□□□□ 0.27
TPM1-211ENST00000558314 HSFX1Q9UBD0 423 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 ITGA11Q9UKX5 1188 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 F5P12259 2224 aa16.71■□□□□ 0.27
TPM1-211ENST00000558314 PATJQ8NI35 1801 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 SPECC1L-ADORA2AF8WAN1 911 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 ARNTLO00327 626 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 TNNC2P02585 160 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 CYP2F1P24903 491 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 NASPP49321 788 aaPredicted RBP16.7■□□□□ 0.26
TPM1-211ENST00000558314 CCR3P51677 355 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 SATB1Q01826 763 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 FCHO2Q0JRZ9 810 aa16.7■□□□□ 0.26
TPM1-211ENST00000558314 LRRC32Q14392 662 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms