RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 KATNA1O75449 491 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 ABHD16AO95870 558 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 MT-CO1P00395 513 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 ZSCAN20P17040 1043 aaPredicted RBP4.86□□□□□ -1.63
CHD8-212ENST00000557329 DDCP20711 480 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 IARSP41252 1262 aaKnown RBP4.86□□□□□ -1.63
CHD8-212ENST00000557329 AVPR1BP47901 424 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 DPTQ07507 201 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 UBXN2BQ14CS0 331 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 PTPN21Q16825 1174 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 TMEM240Q5SV17 173 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 KCNV1Q6PIU1 500 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 FOXR2Q6PJQ5 311 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 FAM177A1Q8N128 213 aaPredicted RBP4.86□□□□□ -1.63
CHD8-212ENST00000557329 NRG4Q8WWG1 115 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 CHMP4CQ96CF2 233 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 GCC1Q96CN9 775 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 CEP95Q96GE4 821 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 TEKT5Q96M29 485 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 NUP88Q99567 741 aaPredicted RBP4.86□□□□□ -1.63
CHD8-212ENST00000557329 TRIM8Q9BZR9 551 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 TAF1DQ9H5J8 278 aaPredicted RBP4.86□□□□□ -1.63
CHD8-212ENST00000557329 HACL1Q9UJ83 578 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 POLHQ9Y253 713 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 NEU2Q9Y3R4 380 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 FPGT-TNNI3KV9GXZ4 949 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 USP54Q70EL1 1684 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 QRICH2Q9H0J4 1663 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 LTN1O94822 1766 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 CCDC88AQ3V6T2 1871 aa4.86□□□□□ -1.63
CHD8-212ENST00000557329 CASP8AP2Q9UKL3 1982 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 TMEM200CA6NKL6 621 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 RPS6KA4O75676 772 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 ANXA1P04083 346 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 APOBEC3AP31941 199 aaPredicted RBP4.85□□□□□ -1.63
CHD8-212ENST00000557329 EPHX2P34913 555 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 DDR1Q08345 913 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 MTM1Q13496 603 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 ABCB5Q2M3G0 1257 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 AGAP9Q5VTM2 703 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 RHOUQ7L0Q8 258 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 ZBTB46Q86UZ6 589 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 ARHGEF19Q8IW93 802 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 RHOT1Q8IXI2 618 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 FITM2Q8N6M3 262 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 SLC17A8Q8NDX2 589 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 CCHCR1Q8TD31 782 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 NUP133Q8WUM0 1156 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 SLC9A6Q92581 669 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 C11orf54Q9H0W9 315 aaPredicted RBP4.85□□□□□ -1.63
CHD8-212ENST00000557329 PCED1AQ9H1Q7 454 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 TAOK3Q9H2K8 898 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 SLC12A5Q9H2X9 1139 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 MMRN2Q9H8L6 949 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 TCF7L1Q9HCS4 588 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 AKIP1Q9NQ31 210 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 TERF2IPQ9NYB0 399 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 CHST2Q9Y4C5 530 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 NOX1Q9Y5S8 564 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 CGNL1Q0VF96 1302 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 MAP3K19Q56UN5 1328 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 PASKQ96RG2 1323 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 MYBBP1AQ9BQG0 1328 aaKnown RBP4.85□□□□□ -1.63
CHD8-212ENST00000557329 SMG6Q86US8 1419 aaKnown RBP4.85□□□□□ -1.63
CHD8-212ENST00000557329 MEGF6O75095 1541 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 TAF1LQ8IZX4 1826 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 SBF1O95248 1867 aa4.85□□□□□ -1.63
CHD8-212ENST00000557329 UBR3Q6ZT12 1888 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 NFAT5O94916 1531 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 RNF123Q5XPI4 1314 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 POLRMTO00411 1230 aaKnown RBP4.84□□□□□ -1.63
CHD8-212ENST00000557329 FAM20BO75063 409 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 SERPINB2P05120 415 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 FTH1P19P0C7X4 201 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 U2AF1L5P0DN76 240 aaPredicted RBP4.84□□□□□ -1.63
CHD8-212ENST00000557329 CKBP12277 381 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 GCSHP23434 173 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 AKAP5P24588 427 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 SLC25A3Q00325 362 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 U2AF1Q01081 240 aaKnown RBP eCLIP4.84□□□□□ -1.63
CHD8-212ENST00000557329 FHL2Q14192 279 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 SEPT2Q15019 361 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 PABPC1LQ4VXU2 614 aaKnown RBP4.84□□□□□ -1.63
CHD8-212ENST00000557329 FAM102AQ5T9C2 384 aaPredicted RBP4.84□□□□□ -1.63
CHD8-212ENST00000557329 GADL1Q6ZQY3 521 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 MRGPREQ86SM8 312 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 REPS2Q8NFH8 660 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 PROKR1Q8TCW9 393 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 COA7Q96BR5 231 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 CLIP3Q96DZ5 547 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 BOD1Q96IK1 185 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 PUS7Q96PZ0 661 aaKnown RBP4.84□□□□□ -1.63
CHD8-212ENST00000557329 PNKPQ96T60 521 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 ASPSCR1Q9BZE9 553 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 DMRT3Q9NQL9 472 aa4.84□□□□□ -1.63
CHD8-212ENST00000557329 DDX21Q9NR30 783 aaKnown RBP eCLIP4.84□□□□□ -1.63
CHD8-212ENST00000557329 SIDT1Q9NXL6 827 aaKnown RBP4.84□□□□□ -1.63
CHD8-212ENST00000557329 ARFGEF1Q9Y6D6 1849 aa4.83□□□□□ -1.64
CHD8-212ENST00000557329 C4AP0C0L4 1744 aa4.83□□□□□ -1.64
CHD8-212ENST00000557329 PDE4DIPQ5VU43 2346 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms