RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ATF6P18850 670 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 BAG6P46379 1132 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 C21orf59P57076 290 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ST8SIA6P61647 398 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 DSTYKQ6XUX3 929 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ELOA2Q8IYF1 753 aaPredicted RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF333Q96JL9 665 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF408Q9H9D4 720 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 XPO7Q9UIA9 1087 aaKnown RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 RAPGEF6Q8TEU7 1601 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 SNRPAP09012 282 aaKnown RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 GHRP10912 638 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 DPYDQ12882 1025 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 CBFBQ13951 182 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 GALNT4Q8N4A0 578 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 PPP1R36Q96LQ0 422 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 WDR41Q9HAD4 459 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 DAPK2Q9UIK4 370 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 EFR3BQ9Y2G0 817 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 CTSWP56202 376 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ZRANB3Q5FWF4 1079 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 TRAPPC11Q7Z392 1133 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 FAM160B2Q86V87 743 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 CD274Q9NZQ7 290 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 FBXO40Q9UH90 709 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 TNRQ92752 1358 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 RPS7P62081 194 aaKnown RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 YEATS2Q9ULM3 1422 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 PRKG1Q13976 671 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SUZ12Q15022 739 aaKnown RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 DPCR1Q3MIW9 517 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 GRPEL2Q8TAA5 225 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 FNIP1Q8TF40 1166 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 MAGED2Q9UNF1 606 aaPredicted RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 NCAPD2Q15021 1401 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 TMEM114B3SHH9 223 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 RPS6KA5O75582 802 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 ATP6V1B1P15313 513 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 CBX5P45973 191 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 EIF2S3LQ2VIR3 472 aaKnown RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 CCDC153Q494R4 210 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 ERP27Q96DN0 273 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 MCCC1Q96RQ3 725 aaPredicted RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SLC9A7Q96T83 725 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 RNPEPQ9H4A4 650 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 RMI1Q9H9A7 625 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 MOSPD1Q9UJG1 213 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 LAMC1P11047 1609 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 GPR162Q16538 588 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 TNFAIP8L3Q5GJ75 292 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 IZUMO3Q5VZ72 239 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 HPS1Q92902 700 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SEC16BQ96JE7 1060 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SYNDIG1LA6NDD5 238 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 RIMBP2O15034 1052 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 TIMM44O43615 452 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SASH1O94885 1247 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 LYNP07948 512 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 PTPN1P18031 435 aaKnown RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 CHI3L1P36222 383 aaPredicted RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 C14orf93Q9H972 538 aaKnown RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 PAK5Q9P286 719 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 TRIM10Q9UDY6 481 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SLC2A3P11169 496 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 AP3S2P59780 193 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SUPT20HL1Q3ZLR7 823 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF790Q6PG37 636 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 MANSC1Q9H8J5 431 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 KCND2Q9NZV8 630 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 C15orf38-AP3S2A0A0A6YYH1 394 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 PHF2O75151 1096 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 TPI1P60174 286 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 CTDSPL2Q05D32 466 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 CYFIP1Q7L576 1253 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 LPCAT2Q7L5N7 544 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 ARPINQ7Z6K5 226 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SLC22A9Q8IVM8 553 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 TBC1D22BQ9NU19 505 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 TRMT6Q9UJA5 497 aaKnown RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 A0A087WXM4 84 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 VPS4BO75351 444 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 TPP2P29144 1249 aaPredicted RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 PRKAA2P54646 552 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 RHAGQ02094 409 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 PDXDC2PQ6P474 469 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 AFG1LQ8WV93 481 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 DLG3Q92796 817 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SENP7Q9BQF6 1050 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 WDR12Q9GZL7 423 aaKnown RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 C6orf62Q9GZU0 229 aaPredicted RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 OSBPL5Q9H0X9 879 aaPredicted RBP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 MTMR6Q9Y217 621 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 VAMP4O75379 141 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 NR3C2P08235 984 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 PDK1Q15118 436 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 UBASH3BQ8TF42 649 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 NEDD4LQ96PU5 975 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 RAD51BO15315 384 aa9.17□□□□□ -0.94
SYNE3-205ENST00000557275 SMNDC1O75940 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
SYNE3-205ENST00000557275 APRTP07741 180 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms