RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SMAP1Q8IYB5 467 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-246ENST00000557030 OR2I1PQ8NGU4 316 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 NRG4Q8WWG1 115 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 STON2Q8WXE9 905 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 NEU1Q99519 415 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 ASPSCR1Q9BZE9 553 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 SENP6Q9GZR1 1112 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-246ENST00000557030 TUBD1Q9UJT1 453 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 SIK3Q9Y2K2 1263 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 PCDHGA9Q9Y5G4 932 aaKnown RBP5.48□□□□□ -1.53
ATXN3-246ENST00000557030 PCDHGA8Q9Y5G5 932 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 PCDHGA7Q9Y5G6 932 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 PCDHGA6Q9Y5G7 932 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 PCDHGA3Q9Y5H0 932 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 MRFAP1Q9Y605 127 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 RGS12O14924 1447 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 NPHP4O75161 1426 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-246ENST00000557030 ATP10DQ9P241 1426 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 TNKSO95271 1327 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 AOX1Q06278 1338 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 IGSF1Q8N6C5 1336 aa5.48□□□□□ -1.53
ATXN3-246ENST00000557030 RTL1A6NKG5 1358 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 FLT4P35916 1363 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 KDRP35968 1356 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 CHD2O14647 1828 aaKnown RBP5.47□□□□□ -1.53
ATXN3-246ENST00000557030 GAGE12BA1L429 117 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 GAGE12HA6NDE8 117 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 MARCH11A6NNE9 402 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 NDUFS2O75306 463 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 TPM3P06753 285 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 RBP3P10745 1247 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 C5AR1P21730 350 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 PROZP22891 400 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 CCND1P24385 295 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 SLC6A9P48067 706 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 CCT4P50991 539 aaKnown RBP5.47□□□□□ -1.53
ATXN3-246ENST00000557030 SP140Q13342 867 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 SEPT2Q15019 361 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 MTHFSDQ2M296 383 aaKnown RBP5.47□□□□□ -1.53
ATXN3-246ENST00000557030 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 MCM10Q7L590 875 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 MRGPRGQ86SM5 289 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 RNF169Q8NCN4 708 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 NGDNQ8NEJ9 315 aaKnown RBP5.47□□□□□ -1.53
ATXN3-246ENST00000557030 OR10H5Q8NGA6 315 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 GPT2Q8TD30 523 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 CCHCR1Q8TD31 782 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 AGAP2Q99490 1192 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 METTL14Q9HCE5 456 aaKnown RBP5.47□□□□□ -1.53
ATXN3-246ENST00000557030 INTUQ9ULD6 942 aa5.47□□□□□ -1.53
ATXN3-246ENST00000557030 A0A087X1B8 175 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 CENPVL1A0A0U1RR11 272 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 GRID2IPA4D2P6 1211 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 FZD9O00144 591 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 ZNF185O15231 689 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 PPFIA4O75335 1185 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 S100BP04271 92 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-246ENST00000557030 RAP2AP10114 183 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 MGAT1P26572 445 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 HOXC9P31274 260 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 BMPR1AP36894 532 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 RAP2BP61225 183 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 KIF23Q02241 960 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-246ENST00000557030 NHLH2Q02577 135 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 MGAT2Q10469 447 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 ODF1Q14990 250 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 BEAN1Q3B7T3 259 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 RAB24Q969Q5 203 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 TMX3Q96JJ7 454 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 TEKT5Q96M29 485 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 TEX101Q9BY14 249 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 LANCL2Q9NS86 450 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 EIF2B4Q9UI10 523 aaKnown RBP5.46□□□□□ -1.54
ATXN3-246ENST00000557030 AJAP1Q9UKB5 411 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-246ENST00000557030 G3BP2Q9UN86 482 aaKnown RBP5.46□□□□□ -1.54
ATXN3-246ENST00000557030 THRAP3Q9Y2W1 955 aaKnown RBP5.46□□□□□ -1.54
ATXN3-246ENST00000557030 ATP6V1DQ9Y5K8 247 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 DMRT1Q9Y5R6 373 aa5.46□□□□□ -1.54
ATXN3-246ENST00000557030 XIRP1Q702N8 1843 aaKnown RBP5.46□□□□□ -1.54
ATXN3-246ENST00000557030 SOS1Q07889 1333 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-246ENST00000557030 LRRC37A3O60309 1634 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 MSH6P52701 1360 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 SYCE3A1L190 88 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 DRGXA6NNA5 263 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 MARCH6O60337 910 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 ENDOD1O94919 500 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 ABHD16AO95870 558 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 GNAI3P08754 354 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 LAG3P18627 525 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 FPR1P21462 350 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 AMPHP49418 695 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 PDE1AP54750 535 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 CLRN1P58418 232 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 PDCD4Q53EL6 469 aaKnown RBP5.45□□□□□ -1.54
ATXN3-246ENST00000557030 CRB2Q5IJ48 1285 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 LY6G5CQ5SRR4 150 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 ODR4Q5SWX8 454 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 CCDC183Q5T5S1 534 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 EFCAB12Q6NXP0 572 aa5.45□□□□□ -1.54
ATXN3-246ENST00000557030 ARHGEF19Q8IW93 802 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms