RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 MAPRE1Q15691 268 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 SOWAHAQ2M3V2 549 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 SGSM1Q2NKQ1 1148 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 WDR72Q3MJ13 1102 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 ZNF667Q5HYK9 610 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 C1orf220Q5T0J3 134 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 RNF19BQ6ZMZ0 732 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 OTOP3Q7RTS5 596 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 FRMD5Q7Z6J6 570 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 TDRD5Q8NAT2 981 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 LEMD2Q8NC56 503 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 CCDC150Q8NCX0 1101 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 OR10T2Q8NGX3 314 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 SPPL2BQ8TCT7 592 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 ACSF2Q96CM8 615 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 FAXDC2Q96IV6 333 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 NECAB3Q96P71 396 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 RTP3Q9BQQ7 232 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 TMEM8AQ9HCN3 771 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 ABCB6Q9NP58 842 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 AVENQ9NQS1 362 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 WDR70Q9NW82 654 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 DDX43Q9NXZ2 648 aaKnown RBP11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 ARMCX3Q9UH62 379 aaPredicted RBP11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 RWDD2AQ9UIY3 292 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 CTNND2Q9UQB3 1225 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 INSL5Q9Y5Q6 135 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 C2orf16Q68DN1 1984 aa11.32□□□□□ -0.6
MTHFD1-214ENST00000556771 REV3LO60673 3130 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 MTMR11A4FU01 709 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 VNN1O95497 513 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 ASS1P00966 412 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 WEE2P0C1S8 567 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 ALDH1A3P47895 512 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 GCLMP48507 274 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 MXI1P50539 228 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 SLC39A12Q504Y0 691 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 INTS6LQ5JSJ4 861 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 KRT39Q6A163 491 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 RPGRIP1Q96KN7 1286 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 DUSP9Q99956 384 aaKnown RBP11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 SNX25Q9H3E2 840 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 FAM124BQ9H5Z6 455 aaPredicted RBP11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 CDH9Q9ULB4 789 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 YIPF1Q9Y548 306 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 ASB3Q9Y575 518 aa11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
MTHFD1-214ENST00000556771 PMM2O15305 246 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 CCL16O15467 120 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 N4BP1O75113 896 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 CLSTN1O94985 981 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 SEC24AO95486 1093 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 HLA-DRAP01903 254 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 OR4Q2P0C623 313 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 TRIM49P0CI25 452 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 TRIM49CP0CI26 452 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 PTPN2P17706 415 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 TRIM21P19474 475 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 EPHB3P54753 998 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 MARSP56192 900 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 DUSP4Q13115 394 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 PABPC1LQ4VXU2 614 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 DCAF17Q5H9S7 520 aaPredicted RBP11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 TCERG1LQ5VWI1 586 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 IQCEQ6IPM2 695 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 C4orf50Q6ZRC1 276 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 FBXL13Q8NEE6 735 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 GPT2Q8TD30 523 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 KBTBD7Q8WVZ9 684 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 EEF2KMTQ96G04 330 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 FUBP3Q96I24 572 aaKnown RBP eCLIP11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 PGLYRP2Q96PD5 576 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 TMEM209Q96SK2 561 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 DNAI2Q9GZS0 605 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 NXF1Q9UBU9 619 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 CDH22Q9UJ99 828 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 POLIQ9UNA4 740 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 PCDHB5Q9Y5E4 795 aa11.3□□□□□ -0.6
MTHFD1-214ENST00000556771 ZNF197O14709 1029 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 P4HA2O15460 535 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 MICAL2O94851 1124 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 VNN2O95498 520 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 RHOP08100 348 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 CCDC192P0DO97 292 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 PTMSP20962 102 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 FSHRP23945 695 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 ERCC5P28715 1186 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 GNL1P36915 607 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 CLCN6P51797 869 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 NLRP12P59046 1061 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 NOP14P78316 857 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 TWF1Q12792 350 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 CETN1Q12798 172 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms