RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 BTBD1Q9H0C5 482 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 PTPRHQ9HD43 1115 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 SARS2Q9NP81 518 aaKnown RBP5.27□□□□□ -1.57
PRPF39-210ENST00000556718 FOXJ2Q9P0K8 574 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 CALCOCO1Q9P1Z2 691 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 FEZ2Q9UHY8 353 aaPredicted RBP5.27□□□□□ -1.57
PRPF39-210ENST00000556718 ATP11BQ9Y2G3 1177 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 PCDHB1Q9Y5F3 818 aa5.27□□□□□ -1.57
PRPF39-210ENST00000556718 CCDC78A2IDD5 438 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 RASA4BC9J798 803 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 RASA4O43374 803 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 MYF5P13349 255 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 ABCG1P45844 678 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 SEPT2Q15019 361 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 ATP2B3Q16720 1220 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 MST1LQ2TV78 715 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 KHDC1Q4VXA5 237 aaKnown RBP5.26□□□□□ -1.57
PRPF39-210ENST00000556718 INO80DQ53TQ3 878 aaPredicted RBP5.26□□□□□ -1.57
PRPF39-210ENST00000556718 ATXN7L2Q5T6C5 722 aaPredicted RBP5.26□□□□□ -1.57
PRPF39-210ENST00000556718 HEATR3Q7Z4Q2 680 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 RHOT2Q8IXI1 618 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 PQLC1Q8N2U9 271 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 REPS2Q8NFH8 660 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 ANKS1AQ92625 1134 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 PHKBQ93100 1093 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 SLC35A4Q96G79 324 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 APIPQ96GX9 242 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 TMX3Q96JJ7 454 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 SGCZQ96LD1 299 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 SENP6Q9GZR1 1112 aaPredicted RBP5.26□□□□□ -1.57
PRPF39-210ENST00000556718 BCO1Q9HAY6 547 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 LANCL2Q9NS86 450 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 TMEM140Q9NV12 185 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 OGDHLQ9ULD0 1010 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 PCDHA3Q9Y5H8 950 aa5.26□□□□□ -1.57
PRPF39-210ENST00000556718 CXorf49A8MYA2 514 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-210ENST00000556718 GASTP01350 101 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 FTH1P19P0C7X4 201 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 TRAPPC10P48553 1259 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 PPM1FP49593 454 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-210ENST00000556718 MXRA7P84157 204 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 OCA2Q04671 838 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 PDCD2Q16342 344 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-210ENST00000556718 TSHZ3Q63HK5 1081 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 ARMC6Q6NXE6 501 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 APOA5Q6Q788 366 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 MED25Q71SY5 747 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 SH2D3CQ8N5H7 860 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 OR2C3Q8N628 320 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 ANKRD42Q8N9B4 389 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 OR7D4Q8NG98 312 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 CCHCR1Q8TD31 782 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 SCARB1Q8WTV0 552 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 RIPOR3Q96MK2 946 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 HERPUD2Q9BSE4 406 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 KLK15Q9H2R5 256 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 WDCPQ9H6R7 721 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 ZNF287Q9HBT7 754 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 PNPLA8Q9NP80 782 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 TRMT13Q9NUP7 481 aaKnown RBP5.25□□□□□ -1.57
PRPF39-210ENST00000556718 PNPOQ9NVS9 261 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 ABCF2Q9UG63 623 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 PADI4Q9UM07 663 aa5.25□□□□□ -1.57
PRPF39-210ENST00000556718 PNPLA7Q6ZV29 1317 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 CCDC189A1A4V9 331 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 CGB1A6NKQ9 187 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 ISM1B1AKI9 464 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 HMGB1P1B2RPK0 211 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-210ENST00000556718 TYRP14679 529 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 SLC7A1P30825 629 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 CRHR1P34998 444 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 PRIM2P49643 509 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 FLT3LGP49771 235 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 CLRN1P58418 232 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 NKX6-1P78426 367 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-210ENST00000556718 PLS1Q14651 629 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 ERAP2Q6P179 960 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 MICALCLQ6ZW33 695 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 PDZD4Q76G19 769 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-210ENST00000556718 SMAP1Q8IYB5 467 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-210ENST00000556718 FBXO18Q8NFZ0 1043 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 BRIX1Q8TDN6 353 aaKnown RBP5.24□□□□□ -1.57
PRPF39-210ENST00000556718 POF1BQ8WVV4 589 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 HOXB13Q92826 284 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-210ENST00000556718 RNF31Q96EP0 1072 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 SUCLG2Q96I99 432 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 SCLT1Q96NL6 688 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 VRK1Q99986 396 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-210ENST00000556718 C22orf23Q9BZE7 217 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 CERS4Q9HA82 394 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 STARD7Q9NQZ5 370 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 GNL3LQ9NVN8 582 aaKnown RBP5.24□□□□□ -1.57
PRPF39-210ENST00000556718 STAP2Q9UGK3 403 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 CORO2BQ9UQ03 480 aa5.24□□□□□ -1.57
PRPF39-210ENST00000556718 MYBBP1AQ9BQG0 1328 aaKnown RBP5.23□□□□□ -1.57
PRPF39-210ENST00000556718 LRRC14BA6NHZ5 514 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 KPNA5O15131 536 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 TEX33O43247 280 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 SH3BP5O60239 455 aa5.23□□□□□ -1.57
PRPF39-210ENST00000556718 GPR32O75388 356 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms